Candidatus Phytoplasma solani: S284_04780
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Entry
S284_04780 CDS
T02881
Symbol
rny
Name
(GenBank) Ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
psol
Candidatus Phytoplasma solani
Pathway
psol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
S284_04780 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psol03019
]
S284_04780 (rny)
Messenger RNA biogenesis [BR:
psol03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
S284_04780 (rny)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH-I_KHDC4-BBP
KH_KRR1_2nd
DUF7217
Motif
Other DBs
NCBI-ProteinID:
CCP88415
UniProt:
A0A421NYR7
LinkDB
All DBs
Position
523657..525240
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AA seq
527 aa
AA seq
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MSGTSPEGCLSMVLLSVVFLSLGISIGYLFYSFFNRKKLDQEQQKFEIQVKNKLEELRQH
EKELIYNAKIEIVSLRQKLEHDLHERTNIVVSLEEKNNRREELFNNRTESLNKREQYLDS
KQQMINHVKKNLEKQIQEHEHLIQQQKIKLEQIAALTPQAAQKIIMDEVRDKTANEVFAY
IKKEEEKAKSEVAKKAKMFLISAMQKYAGDVTGEKNISVVEIPNEEMKGRIIGRQGRNIK
SLEVLTGVDLIIDDSPLTVVVSSFDPVRREIAKKTLESLVSDGRIHPSRIEKALEQSTTE
VDNFIKEMGEEAVFITKIGEVHQDLIKILGKLHFRLSYSQNILKHSLEVAFLAGKLAAEI
GENEILARRAGLFHDIGKALDHEIEGSHVEIGVALASKYKEKKEVIDAIASHHEDKPPQT
VIAVLVAIADTLSSARPGARKESIENYIQRLTKLENIANSIKGVAHSYAIQAGREIRVIV
KPDKINDDFIFQVARIIKEQIEQDISYNGIIKVTVIREIRAIEIVKL
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgagcggaacatcaccagaaggatgtttaagcatggtcttgctttctgttgttttttta
tctttaggcatttccataggttatttattttattctttttttaatcgaaaaaaactagat
caagagcaacaaaaatttgaaatacaagttaaaaacaaattagaagaattgcgccagcat
gaaaaagaattgatttacaatgccaaaatagaaatagtttccttaagacaaaaactggaa
catgatttgcatgaaagaactaatattgtagttagtttagaagaaaaaaataatcgtcgt
gaagaattattcaataatagaacagaaagtttaaataaaagagaacaatatttagattct
aaacaacaaatgatcaatcatgttaaaaaaaatctagaaaaacagattcaagaacacgag
cacttaatacaacagcaaaaaattaaattagaacaaatagctgctttgacaccacaggca
gcacaaaaaattattatggatgaagttagggataaaaccgctaacgaagtttttgcatat
attaaaaaagaagaggaaaaagcaaaatcagaagtcgctaaaaaagcgaaaatgttttta
atttcggcgatgcaaaaatatgctggcgatgttacaggcgaaaaaaacattagtgttgtt
gaaatacctaacgaagagatgaaaggtcgtattatcggccgtcaaggtagaaatatcaaa
tctttagaggttttaacaggggtggatttaattattgacgattctcctttaacagtagtt
gttagtagttttgaccctgttagaagggaaattgctaaaaaaactttagaatcgttagtt
tctgatggtagaattcatccttcgcgcatcgaaaaagccttagaacaatcaactacagaa
gttgacaattttattaaagaaatgggcgaagaagcagtttttattaccaaaattggcgaa
gttcatcaggatttaatcaaaattttaggaaaattacattttcgcttaagttatagtcaa
aatattttaaaacattctttagaagtggcttttttagctggaaaattagctgcagaaatt
ggtgaaaacgaaattttagccagaagagctggtctttttcatgatattggaaaagcttta
gaccacgaaatagaagggagccatgtagaaattggcgtcgctttggcgagtaaatataaa
gaaaaaaaagaagtgattgacgccatcgcttctcatcacgaagacaaacccccgcaaact
gttattgctgttttagttgctattgcagacactcttagttcggcaagacctggagctaga
aaagaatcaatagaaaattatattcaaagattaactaaattagaaaatattgctaattct
attaaaggagtggctcattcttatgccatccaagctggtcgtgaaattagagttatcgta
aaaccagacaaaataaacgatgattttatttttcaagtcgcaagaattatcaaagaacaa
attgaacaagatattagttacaatggaattattaaagttactgttataagagaaataagg
gctattgaaatagttaaattatag
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