Candidatus Phytoplasma solani: S284_04840
Help
Entry
S284_04840 CDS
T02881
Symbol
topA
Name
(GenBank) Topoisomerase IA, partial CDS
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
psol
Candidatus Phytoplasma solani
Brite
KEGG Orthology (KO) [BR:
psol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psol03032
]
S284_04840 (topA)
03400 DNA repair and recombination proteins [BR:
psol03400
]
S284_04840 (topA)
Enzymes [BR:
psol01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
S284_04840 (topA)
DNA replication proteins [BR:
psol03032
]
Prokaryotic type
DNA Topoisomerases
S284_04840 (topA)
DNA repair and recombination proteins [BR:
psol03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
S284_04840 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
CCP88421
LinkDB
All DBs
Position
529400..>531067
Genome browser
AA seq
556 aa
AA seq
DB search
MKQKVIIVESPAKIKTLSRFFDNKIEILSSKGHIRDLSLLGKDKLGIDIKNGFIPKYEII
KDKNSLVETLQQKTKNKEVFLATDPDREGEAIAWHLSKVLNLKPQSANRIVFREITKEVV
LKALEQPRKIDELLVFSQETRRMLDRIIGFKLSRVVRRIKSQSAGRVQSVALKLIVDLEK
EINAFVPEEYHLITAFFSSFQAEYQNPQNKKIKASEALQIIKSIAKKPFIVKKIKQSQIL
QNPKKPLITSTLQQEAINYLYMTSNQTMRVAQKLYEGIDVAGEQVGLITYIRTDSQRFSD
VFVKDAQKFIKSKYGKKYLSVFRQTKTNQTQDAHEAIRPTDLSKTPENLAPYLDKYEYRL
YELIYKRTLASFMKSAVFQKNQVFFEVEKHSFLTEGLVKIFDGYQKILTDTTKDKIIPEF
HLNETYLPEEIQDLQKFTTPPARFSEATLIKTLEKLNIGRPSTYSQIIFTLKKRFYVDLL
EKRFFPTEQGILTIQNLEKFFEQILDTQYTAKMEEDLDQIASGTVDSKQLLQKFYQNFHK
LYQIADKMIEKVKPIE
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaaaagttattatagttgagtctcctgctaaaatcaaaactttaagtcgtttt
tttgataataaaatcgaaattttatcttccaaaggacacatcagagatttgtctttatta
ggcaaagataaacttggaattgacattaaaaatggctttattcctaaatatgagatcatt
aaagataaaaatagtctagttgaaactttgcagcaaaaaactaaaaataaagaagttttt
ttagcgactgatcctgaccgcgaaggggaggcaattgcttggcatttatcaaaagttctt
aacttgaaacctcaaagtgctaatagaattgttttccgagaaatcaccaaagaagtagtt
ttaaaagctttggaacaaccgcgtaaaattgacgaattattggttttttcgcaagaaact
agaagaatgcttgaccgtattattggttttaagttatctcgtgtagttagaagaattaaa
tcccagtctgccggtagagtacaatcggtagctttaaaattgattgtagatttagaaaaa
gaaattaatgcttttgttcctgaagagtatcaccttattactgcttttttttcatctttt
caagctgaataccaaaatcctcaaaacaaaaaaattaaagcttcagaggctttacaaatt
attaaatctatcgccaaaaaaccttttatagttaaaaaaattaaacaatctcaaatcctt
caaaacccaaaaaaacctttgattacttcgactttgcaacaagaagccatcaattatctt
tatatgacttctaaccaaacaatgagagtcgctcaaaagctttacgaaggaattgatgtg
gcaggcgaacaagtgggattaatcacttatataagaaccgattctcaaagattttctgat
gtttttgtcaaagacgctcaaaaattcattaaatccaaatatggtaaaaaatatttatca
gtttttcgccaaactaaaacaaatcaaactcaagacgctcatgaagctattagaccgact
gatttaagtaaaactccagaaaatttagctccatacctagataaatatgaatatcgcttg
tacgagttaatttataaaagaacgttagcaagctttatgaaatcggctgttttccaaaaa
aatcaagttttttttgaagtcgaaaaacactcctttttaacagaagggctagtaaaaata
tttgatggttatcaaaaaattttaactgataccactaaagacaaaattatcccggaattt
catttaaatgaaacatatttacctgaagaaattcaagatttgcaaaaatttaccacccca
ccggctcgtttttcagaagctactttgattaaaaccttagaaaaacttaacattggtaga
ccttcgacttattcgcaaattattttcactctcaaaaaaagattttatgtagatctgtta
gaaaaacgttttttcccgactgagcaaggtattttaactattcaaaatttagaaaaattc
ttcgaacaaatcctagatactcaatatacagccaaaatggaagaagatcttgaccaaatt
gcttccggaacagttgatagtaaacaattactgcaaaaattttaccaaaattttcataaa
ctttatcaaatagcagataaaatgattgaaaaagtaaaaccgattgaa
DBGET
integrated database retrieval system
