Papaver somniferum (opium poppy): 113271477
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Entry
113271477 CDS
T05758
Name
(RefSeq) protein CHROMATIN REMODELING 25-like isoform X1
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
113271477
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psom03400
]
113271477
DNA repair and recombination proteins [BR:
psom03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
113271477
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
113271477
NCBI-ProteinID:
XP_026377136
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All DBs
Position
4:complement(144949589..144954171)
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AA seq
341 aa
AA seq
DB search
MGLGKTLQSIALLYTLLRQGFDGEPMAKKAIIVTPTSLVSNWESEIKKWVGDRLQLIALC
ESTRDDVVSGLDSFIRPHSPYQALAGLSCNRRILLSGTPMQNDLEEFFAMVNFTNPGILG
DAAYFRRYYESQIISGREPTSTEEERNLSVERSAELSTKVNQFILRRTNALLSNHLPPKI
VEVVCCKLSPLQSELYNHFIHSKNVKRAISEEAKQSKFLAYITALKKLCNHHKLIYNTIK
SGSGTSGFEDCICFFPPAMFFGRSGAWTGGDGVWVELSGKMHVLARLLAQLRSKTDDRIV
LVSNYTQVQMRGFEGNVVNVCKHGNMPVIMDSFAKGNSQKY
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgggtttggggaagactttacagtcaatcgcattactgtatactcttcttcggcaggga
tttgatggagagcccatggctaaaaaggcaataattgtcactcctaccagccttgtaagt
aattgggaatctgaaattaagaaatgggtcggagatagacttcaacttattgctctttgt
gagagcaccagggatgatgttgtttctggattagacagtttcattagaccgcacagtcca
tatcaggcattagctggtctttcatgcaaccgacgcatattattgtcagggaccccgatg
cagaatgatctggaagagttctttgcgatggttaattttaccaatccaggaatcttgggg
gatgctgcatattttcgacgatactatgagtcacagatcatttctggaagagaacctaca
tcaacagaagaagagagaaatcttagcgttgagcgatctgctgaattaagcacaaaagta
aatcagtttattttgaggaggaccaatgctttgctatcaaatcatctaccaccaaagata
gttgaagttgtctgttgcaagttgagtcctcttcagtcagagttatataaccattttata
cattccaaaaatgttaagcgagcaatatctgaagaggcgaaacaatcaaaatttttggca
tatatcactgctttgaaaaagctttgcaaccatcataagcttatctataatacgatcaaa
agtgggtcaggaacgtcgggatttgaggattgcatttgcttttttcctcctgcaatgttt
tttggaagatctggagcatggactggtggtgatggggtttgggttgaactttctgggaag
atgcatgttttagctcggttgctggcccaattgcgtagcaaaactgatgaccgtattgtt
cttgtttccaactatactcaggtacagatgagaggatttgaagggaatgtggtcaatgtg
tgtaaacatggaaacatgccagtaataatggattcctttgcaaagggtaattcccaaaaa
tattag
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