Papaver somniferum (opium poppy): 113271511
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Entry
113271511 CDS
T05758
Name
(RefSeq) pre-mRNA-splicing factor CWC24-like isoform X1
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psom04121
]
113271511
Enzymes [BR:
psom01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113271511
Ubiquitin system [BR:
psom04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113271511
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-RING_6
zf-C3HC4_4
zf-RING_4
zf-rbx1
Prok-RING_4
zf-RING_10
zf-Nse
Zn_ribbon_6
RING_XB3-XBAT31
zf-ANAPC11
zf-RING_11
Baculo_IE-1
Sina_RING
Motif
Other DBs
NCBI-GeneID:
113271511
NCBI-ProteinID:
XP_026377182
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All DBs
Position
4:complement(146910924..146914412)
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AA seq
190 aa
AA seq
DB search
MQRSRAIKRNALEDLELRLGPSYSHKGDMLGRNCVRGFPNLITIDDDEDDDVIMYSQSTS
TGVHLYEIPLFPITSSWAPVVTEEDLELCLGFRGHAGAIVHNAEGRGEPSQTWKCVKTKY
ARMTEMEGVKLRCTICMDTMKEETSTLCGHIFCKACIVNAIRVQNRCPACRKEVSLNNIH
RIYLPGATIS
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagatcaagagcaatcaagaggaatgctcttgaagatcttgagttaagattaggg
ccatcttattcacacaaaggagacatgctgggtagaaattgtgttaggggattccctaat
ttaatcactattgacgatgatgaagatgatgatgtgattatgtattctcagagtacttct
acaggggtacatctctatgagattccactgtttcctattacaagctcatgggcacctgtt
gttacagaggaagatttagagctttgccttggatttagaggacatgctggggccatcgtg
cacaatgccgaaggaagaggagaaccttcgcaaacttggaagtgtgtcaagacaaagtat
gcacgcatgacggagatggaaggtgtaaagttgaggtgcacgatctgcatggatacaatg
aaggaggagacatcgactctttgtggccacatattttgtaaagcttgcatcgtgaatgct
attagagttcagaataggtgccctgcttgccgtaaggaagtctcattgaacaatattcac
cgtatctatctaccaggagctactatttcctga
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