Papaver somniferum (opium poppy): 113271617
Help
Entry
113271617 CDS
T05758
Name
(RefSeq) uncharacterized protein LOC113271617
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psom03019
]
113271617
Messenger RNA biogenesis [BR:
psom03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
113271617
Surveillance factors
Other surveillance factors
113271617
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
Motif
Other DBs
NCBI-GeneID:
113271617
NCBI-ProteinID:
XP_026377295
LinkDB
All DBs
Position
4:153396468..153405387
Genome browser
AA seq
1620 aa
AA seq
DB search
MANNDKFDLPEDLLSLKSSDLPWASSSSSKEIAGGHYDEKGMMGFLDETKDQGTLDNIIP
LSPQWLHAKTSETKTGISGLPGEIRATNPMSHGNSIDLVLKEGWRLDGSQDKKDWRRNAP
DTDNSLRWREEERETGLLGRRDRRKDNGSSRETADTRVLPSPDRWLDAGNRNSGQETRRD
GKWSSRWGPEDKEKDSRTEKKLDVEREDIQNEKQLLGSSRATPDREIESRDKWRPRHRLE
VHSAGSSVYRAAPGFGLERGKVEGSKVGFAPGRGRSSIIGRPSSACPIGAPPADTHGKSG
VPGVSFHYPRGKLLDIYRKQKPTSNEIPDGLKEVSSMGQTGLVEPLAFVVPSVEEGAVLN
DIWNGKITGSGVFSDSSRDKMSSEGVTGDPYLKEGEYSFSAEVGKIDQSDGFTTTFLKVD
DTSNVRQLDRSHHNDLQSRVSACIKHVTSEDFESSASLNAGAKLPDEPTSFNLPIFQNSD
SNDIKNGEPNVSERGPSPEEMSLYYRDPQGETQGPFLGADIISWFDQGFFGPDLLVCPSD
APEGTPFQELGEVMPLLKLKPWSDSAATPFSRVEPCDAVGSFDQPAPTMVPDFMGLTVSG
DQKWGTSEFENLSAAQVHSLISKSEDPVEPHDSEVERFHEFIAQNEESMLSGRSDCSSEI
PVGEPSGIVHDNLTSFTSHPFLSNDNQLHNRTGRPELAEPNMPQIKDNQLHPFGLTWSEL
ESVPSRHVQSSSMLSGISDQGHFINPTAGRDVSLPLHRQSSFGAVSDSAHGGEAWGDSYR
RSLLSNTNPLLDYSDARHLSRLEQDNNHFLTEQLMAQQLQQQNQHKNLMSSHSSQYLNGS
FLEQLPSSAMSEGRIPLHHQQQNPDLEHLMKLRFQRQRQYQLQLQQQQQQQKLQQQQQLQ
HQMQLQQQQQQQSKVQQFVLEQLLHQQLHDPGYGQSRIDHHRGNNMLDQALLRQQHLHEL
QQHHSLSSATVDPSLEQLIQAKYGQRIQHEQQSDILELLSRAKHGQLHPLEHQALLQQEQ
LHARQFSMALRQQMGLEEERHVSDIWPADESAQFIRSVAGSHQAHSAGIGSLDLYQRQQR
FAEEQASLLERNRAIQERLQRRPYEPSALPFERSSSLPTGGPAMNLDALNAFPHPQIQDM
PDWHTQVHVSGQAGSFSSGMHSQQPQVPSQFKASHLDGIGSQWSESKGHQDNRWIEARIQ
KLKLESEQYRRQLEVNSLPSDEQSSWVPTGGTDESSKQALFDALHQKLGVHSTQPLQMGD
MVPASSFERKDPSWPFSGSSSSEHVFNLFGGQEEGKSFAEVPHGSDSTNLLQDQFIRLGM
DEQSSCLESSEIKLHEHNTGILPEEEHSVSGVSEIPQSTQADTNTTEPSEDKDLAEEKDE
KKGKKRGSKTKGSTNKTSLELQEGMAEQAKPSAIQRVELPANTPIRHTSLGTTGGNAGTH
NYEMGMDSRAREDMTKGRISSAISKGQDNTPMRRPPVSRVLSSQEALSDMASVSTAGKSS
MSTVPLHDGGKRNAGGNPVNHASVTVAAGNKKDVMAFRRTSSCSDASDVLETSFIDMLKS
NSKKPSIPDSDAGMSELSDAGAGRGGKKKGKKGRQIDPALLGFKVTSNRIMMGEIQRLDD
NT seq
4863 nt
NT seq
+upstream
nt +downstream
nt
atggcgaataatgataagtttgatttaccagaagatctcctttcgttgaaatcttctgat
ttaccttgggcttcttcttcttcttctaaagaaattgcaggtggacattatgacgaaaaa
gggatgatgggatttctggatgagacaaaagatcaggggacactggataacatcatacca
ttatctccccaatggctgcatgctaaaacaagtgaaactaagacaggaatatctggcttg
ccaggggaaataagggccacaaaccccatgtctcatggtaactcaatagatttggttctg
aaagaaggttggcgtctggatgggtctcaggacaagaaggattggagaagaaatgcaccc
gacactgataatagtctccggtggcgtgaagaagagagagaaactggattactaggtaga
agagatcgtagaaaagacaatggctccagtagagaaactgctgatactcgagttttgcct
tcccctgataggtggcttgatgctggtaatcgtaattctgggcaggaaacacgacgagat
ggaaaatggtcttcaagatggggacctgaagataaagagaaggattctcgcactgagaaa
aagttggatgtggagagagaggacatccagaatgaaaaacagttgcttggcagcagtcgt
gcaactccggatcgtgaaatagaatctcgtgataaatggaggccacgccatcgactggaa
gttcattctgctgggtcttcagtttatcgtgctgcacctggatttgggcttgagagagga
aaggtggagggttcaaaagtaggatttgctcctggtcgtgggaggtccagcattattggc
aggccttcgtctgcttgtccaattggtgctccccctgcagatacacatggaaaatctggc
gtgcctggggtatcatttcactacccaaggggaaagcttcttgatatttatcggaaacaa
aagcctacatctaacgaaattcctgatgggttaaaagaagtgtcttcaatggggcaaacg
ggcttagttgaaccgttggcgtttgttgtacctagtgtcgaagaaggggctgttctcaat
gatatttggaatggaaaaattacaggcagtggagtgttttcagattcatccagagacaag
atgagcagcgaaggtgtcacaggggatccttatcttaaagaaggagagtatagtttttct
gctgaagttggtaagatagaccagagtgatggtttcacaacaacatttctgaaggtcgat
gataccagcaatgtaagacagcttgacagaagtcatcacaatgacctgcaatctagagta
tctgcatgtattaagcatgttacatccgaagattttgagtcttctgcttccttgaatgct
ggcgcaaaattacccgatgaacctacttcttttaatctcccaattttccagaattctgat
agcaacgatattaagaatggagaaccaaatgtatcagaaaggggtccctcacctgaggag
atgagtttgtactacagggatcctcaaggggagactcagggcccatttttaggtgctgac
atcatttcatggtttgatcaaggcttttttgggcctgatttactggtttgtccgtcagat
gctccagaaggaacaccttttcaagaacttggagaggtcatgccactactgaaacttaag
ccatggtccgactcagccgccacccctttctctagggtagaaccatgtgatgctgttggc
agctttgatcagcctgcacccaccatggttcctgactttatgggtctaactgtttctggt
gatcagaagtggggaacatcagagtttgagaatctttcagctgcccaggtgcattcttta
atttcaaaaagtgaagatccagtggaacctcatgactctgaggttgaacgctttcatgaa
ttcatcgctcaaaatgaagaatctatgctatctggaagatctgattgtagcagtgagatt
cctgttggggagccttctgggatcgttcatgataacttgacaagttttaccagccatcct
ttcctttcaaatgataatcagttgcataaccgaactggaagacctgagttggcagaaccc
aacatgccacagatcaaagataatcagttgcatccctttggactaacatggtctgagctc
gaaagtgttccatctaggcatgtccagtcgtctagtatgctgtctggaataagtgatcag
ggccattttataaaccctacagctggaagggatgtctctcttcccctccacaggcagagc
tcctttggagcagtatctgattccgctcacggtggggaggcgtggggtgatagttacaga
agaagtttactttcaaatactaaccctctcctagattactccgatgctcgccacttgtct
cgcttggaacaagacaacaaccactttctgacagagcagttgatggcgcaacagttgcag
cagcaaaatcaacacaaaaatctaatgtcttcacactcttctcagtatctgaatggttca
tttttggagcaattaccaagttctgctatgtctgagggaagaattcctcttcaccatcaa
caacaaaatccagatctggaacatcttatgaaacttcggtttcaacgtcagcggcagtat
cagcttcaattgcagcagcagcagcagcagcaaaaactgcagcagcaacaacagcttcag
caccagatgcaattgcagcaacaacagcagcaacagtccaaagttcaacagttcgttctt
gaacagttgctgcatcagcagctgcatgatcctggttatgggcaatcgcggattgatcac
catagaggcaataacatgctagatcaggcattattgaggcaacagcatctacatgagttg
cagcaacaccattctttatcatctgcaactgtcgacccttccttggagcagttaatccaa
gccaaatacggacagcgcatacaacatgaacaacaaagtgatattctggagctcctatca
cgagcaaagcatggccagttacatcctttggaacatcaagctcttcttcagcaagagcag
ttgcatgcaaggcagttctccatggcattaaggcagcagatgggtttggaagaagagagg
catgtgagtgacatttggccagctgatgaatctgcacagttcatcaggtcagttgctggc
tcccaccaggctcactctgcagggattggttccttggatctttaccagcggcagcagaga
tttgccgaggagcaagcgagccttctagagagaaaccgtgctatacaggaacggctgcag
cgtaggccttacgagccaagcgcactgccgtttgaaaggtcatcatctctccctactggt
ggtcctgctatgaaccttgatgctctaaatgcattccctcatcctcaaattcaggacatg
ccggactggcatacccaggtgcatgtttctggtcaagcgggttcattttcgtcaggcatg
cactctcagcagccgcaagttccttcacagtttaaggcctcacatctggatggaataggg
agccagtggtctgagagtaaaggacatcaagataataggtggatagaagctcgaattcag
aaactgaaacttgaatctgagcagtacagaaggcaattagaagttaacagcttgccatcc
gatgagcagagctcctgggtaccaacaggaggaactgacgagagctcgaagcaggctttg
tttgatgcactccatcagaaattgggtgttcactctactcaacctttacaaatgggcgat
atggttcctgcttcatccttcgagagaaaggatccctcttggccattttctgggtccagt
tcatcggagcatgtatttaatttgttcggaggtcaagaagaaggcaaatcttttgcagaa
gtacctcatggttctgattcaaccaacttattgcaggatcagtttatacgcttgggcatg
gatgaacagtccagttgtttggaaagcagtgaaattaaactccatgaacataatactggg
atattgcctgaagaagagcattctgtttcaggcgtgagtgagattcctcagtctactcaa
gcagataccaacactaccgaaccatcagaagacaaagacttggccgaggaaaaggatgag
aaaaagggaaagaagcgtggctctaaaaccaagggttcgactaataaaacctctctagag
ttacaggaaggcatggctgagcaagccaaacccagtgctatacaacgcgtggagcttcct
gctaacactccaatcaggcatacttctctcggaactactggtggaaatgcgggcacccat
aattatgagatgggaatggacagtagagctcgtgaagatatgaccaagggcagaatatct
tctgccatctccaaggggcaggacaacactccaatgaggcgtccaccagtttcacgggtt
ttgtcatcccaggaggctttatcagatatggcttctgtctcaactgctggaaagagttca
atgagtactgttccactccatgatggtgggaaacggaatgccggagggaatcctgtgaac
catgcgtcagttactgtagcagctggtaataagaaagatgttatggcatttcggaggaca
tcgtcatgcagtgatgcatcggatgttttagagacctcatttatagatatgctgaagagc
aactccaaaaagccatcaataccagactcagacgcgggtatgtcagagttatcagatgct
ggtgcaggtagaggtggaaagaagaaagggaagaaaggaaggcaaattgatcctgctctc
cttggttttaaggtgaccagcaaccgtatcatgatgggtgagatccaacgtcttgacgac
tag
DBGET
integrated database retrieval system
