Papaver somniferum (opium poppy): 113271714
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Entry
113271714 CDS
T05758
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH14-like
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psom03400
]
113271714
Enzymes [BR:
psom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
113271714
DNA repair and recombination proteins [BR:
psom03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
113271714
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
WHD_SNRNP200
DExH14_plug
ResIII
Helicase_C
AAA_22
AAA_30
AAA_19
DEXQc_Suv3
PhoH
Helicase_PWI
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
113271714
NCBI-ProteinID:
XP_026377406
LinkDB
All DBs
Position
4:complement(157797057..157815865)
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AA seq
2098 aa
AA seq
DB search
MLVELPRLTNSLRVPYDVDKAYLERKIFLQNHNKPQRPGNSLDDSELARNIVHHWEQASN
EVRQAYKKFLGSVVELIDGEVSSEEFRQVAKTVYRLFGAPQEDDVKNNRSKISASKKEEL
QKCIGYNVPDIKIQKVASLAQKLFLLQPSGNGDDASISEVRVDVGGENSAEFGSELVFHA
PTRFLVDESLNNELLLEEESSMMSSLHGEQYNHIESVPNNFVVDKGKVDLRWLRDECDQI
VRQSGSQLPTDELAMALCQVLDSDRAGDEIAGELLDLVGDGAFEIVQDLLKHRKELVEAI
HHGIVVLKSEKAPTIQPKMPSYGTQVTIQTETEKQIDKLRRKEEKKQRRGTEHGVENDLS
AGNFSSLLQASESKGLFDDLIGSGQGSSKFVVNSLPQGTVRKNLKGYEEVSIPATETAQM
KPGERLIEIKELDDFAQAAFHGYKSLNRIQSRIYQATYHTNENILVCAPTGAGKTNIAMI
AVLHEIKQHYRDGILHKNEFKIVYVAPMKALAAEVTATFSHRLAPLNLNVKELTGDMQLS
RSELEETQMIVTTPEKWDVITRKSSDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVARTL
RQVESTQSMIRIVGLSATLPNYLEVANFLRVNPEAGLFFFDSSYRPVPLAQQYIGITEQN
FAARTNLINEVCYKKVVESLKQGHQAMIFVHSRKDTSKTAKTMIEFSQKSEDTELFRNDE
HPMYALIKKDVQKSRNKEVAELFESGIGIHHAGMLRADRGLTERLFSEGLLKVLVCTATL
AWGVNLPAHTVVIKGTQLYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHDK
LAYYLRLLTSQLPIESQFISSLKDNLNAEVALGTVTNVKEACAWLGYTYLFIRMKSNPLE
YGIGWDEVMADPSLISKQRSLVTDAARSLDKAKMMRFDEKSGNFYCTELGRIASHFYIQY
SSVETYNEMLRHQMSDSEVINMVAHSSEFENIVVREEEQDELETLVRRSCPVEVKGGPSN
KHGKISILIQLYISRGSIDSFSLISDAAYISASLARIMRALFEICLRRGWCEMTSFMLDY
CKAVDRQIWPHQHPLRQFDRELSAEVLRKLEEREVDLDRLLEMEEKDIGLLIRYAHGGKI
VKQYLGYFPWINLSATISPITRTVLKVDLLITPEFVWKDRFHGLVQHWWILVEDSKNDHI
YHSELFSLTKKMARGESQKLSFTVPIFEPHPPQYYIRAVSDSWLHADTCYTISFQNLALP
EARTSHTELLDLKPLPVSSLGNKAYEALYRFSHFNPIQTQTFHVLYHTDNSVLLGAPTGS
GKTISAELAMLHLFNTQPDMKVIYIAPLKAIVRERMKDWRTRLVSQLGKKMVEMTGDYTP
DLMALTSADIIISTPEKWDGISRNWHSRSYVTKVGLLILDEIHLLGADRGPILEVIVSRM
RYVSSQTERAVRFVGLSTALANACDLADWLGVGDAGLFNFKPSVRPVPLEVHIQGYPGKF
YCPRMNSMNKPAYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDEHPIQFLNMGE
EALQMVLSQVTDQNLRHTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGV
NLPAHLVIIKGTEFYDGKAKRYVDFPITDILQMMGRAGRPQFDQHGKAVILVHEPKKSFY
KKFLYEPFPVESNLREQIQDHINAEIVSGTICHKEDAVHYLTWTYLFRRLVVNPAYYGLE
DTESKTLNSYLSSLVQNTFEDLEDSGCIKMNDDSVEPLMLGSMASQYYLSYMTVSMFGSN
ISSNTSLEVFLHILSGASEYNELPVRHNEENYNEALSKRVPYLVDNNSLDDPHVKANLLL
QAHFSQLEMPISDYVTDLKSVLDQSIRIIQAMIDICANSGWLTSTLTCMHLLQMVMQGMW
FERDSSLLMLPSMNSELVSLLGKRGISNVQQLLSLPKATLQSLIENFPVSQLYQELQQFP
YIHLRLRLQERDREGFRSRFLNIKMEKTNYKHKTRAFTPRFPKLKDEAWWLVLGNVSTSE
LYALKRVSLSDRSLVTNMEIPSSVISLHGVKLILVSDCYLGFEQEHPIEELLNPRIER
NT seq
6297 nt
NT seq
+upstream
nt +downstream
nt
atgttggttgaattgcctcgtttgacaaattcacttagagtcccatatgatgtcgataaa
gcttacttggaacgcaaaattttcctccaaaatcataataaacctcaaaggcctggaaat
tctctcgatgattcagaacttgctcgaaacatagtccatcattgggaacaagcatcaaat
gaagtgcgtcaagcatataaaaaatttcttggttcagtagtagagttaattgatggagaa
gtatcatctgaggaattcagacaagtagctaaaacagtttatcgtctctttggtgctcct
caagaagatgatgttaagaacaatagatctaaaatatcagcatccaaaaaggaagaatta
caaaagtgtattggttacaatgttccggatattaagattcagaaagttgcttcactcgct
caaaagctcttcctcttgcagcctagtggtaatggagatgatgctagtatctcagaagtg
cgagttgatgttggtggtgagaattcagcggagtttgggagtgaattagttttccatgca
cctacccggtttcttgttgacgagtctttgaacaatgagctacttttggaagaggaaagc
tccatgatgtcttctcttcacggagaacaatataaccatattgaatctgtacctaataat
tttgttgtggacaagggaaaagtggacttgagatggttaagagatgaatgtgatcagata
gttagacaaagtggttcacaacttcctacagatgagctagctatggccctttgtcaagtt
cttgattcagatagagcaggagatgagattgctggcgagttgttagatcttgttggggac
ggcgcatttgaaattgttcaagatcttttgaaacatagaaaggagcttgttgaggcaatc
catcatgggattgttgtccttaaatcagagaaagctccaaccatccagccgaaaatgcct
agttatggcacacaggtcactattcaaactgagaccgaaaagcaaatcgataagctccga
cgcaaggaagaaaaaaaacagagacgtggaacagaacatggggttgagaatgacttgtct
gctggaaatttctcttccttacttcaagcaagtgagagcaaaggtctctttgatgatttg
attggcagcggccaaggttctagtaaatttgtagtgaactctcttcctcaaggtactgtt
aggaagaacttgaaggggtatgaggaagtcagtatccctgctacagaaactgcacaaatg
aaacctggggagcggctgatcgagataaaagaattagatgactttgctcaggctgctttc
catggctacaagtccctgaaccgtattcagagtcgtatttaccaagccacttatcatact
aatgagaacatattagtttgtgctccaacaggagctggtaaaaccaatatcgctatgatt
gctgttttacacgagattaaacaacactaccgagatggtattttacataaaaatgaattt
aaaatcgtctatgttgctcctatgaaggctttagctgcagaggtgacagcaaccttcagc
catcggttggctccattaaatttgaatgtgaaggagcttactggggacatgcaactgtca
aggagtgagcttgaggaaactcagatgatagttacaacacctgagaaatgggatgtcatc
actcgcaaaagcagtgacatgtcattgtcaatgctagtgaaactgttgattattgatgaa
gtacacctgttgaacgatgatagaggacctgtaatagaggcattagttgcaaggactctt
cgccaggttgagtccacacaatcaatgatacgcattgtgggtctttctgccactcttccc
aattacttggaggttgcgaactttctgagggtgaatccggaggcaggactcttcttcttt
gattccagctatcgtcccgtgcctcttgcacaacaatatatcggaatcactgagcaaaac
tttgcggctcgcaccaacctcataaacgaagtatgctataaaaaggtggtagaatcactg
aagcagggccaccaggcaatgatttttgttcattcacgcaaggacactagtaaaacagca
aagacaatgattgaattttcccagaagagtgaagataccgagttgtttaggaatgacgaa
catccaatgtatgccttaataaagaaggatgtgcaaaaatcaagaaacaaagaagttgct
gagttgtttgaatctgggattggtattcatcatgctgggatgttgcgcgctgacagaggt
ctgactgagcgtctcttctccgaaggtctcctgaaggttcttgtttgcactgctacattg
gcatggggagtaaatttacctgctcacacagttgtcataaagggaacccaactatatgat
ccaaaggccggtggatggcgagatctgggcatgcttgatgttatgcagatcttcgggcga
gctgggagaccacaatttgacaaaagcggtgaaggcattatcataacatcacatgataag
ttagcctactatttacgactgctgacaagtcagcttccaatagaaagtcagtttattagc
tcattgaaagacaacttaaacgcagaggtggcactgggtactgttaccaacgtcaaggaa
gcttgtgcctggctgggatatacatatcttttcataaggatgaaatcaaatccattggag
tatgggataggatgggatgaggtcatggcagatccttctttaatctcaaagcaaagatcc
cttgtaacagatgctgctcgctcccttgacaaagcaaaaatgatgcggtttgatgagaaa
agtggaaatttttactgtacagaacttggtcgcattgcaagtcacttttatattcagtac
tctagtgtggaaacatacaatgaaatgctcaggcatcagatgagtgacagtgaggtgatt
aatatggtggcccattcatctgaatttgaaaatattgttgtaagggaagaagagcaggat
gaactagaaaccctggttcgcagatcatgccctgtggaagtaaagggtggtccttcgaat
aaacatgggaaaatctcaatcctaattcagttgtacatatcacgaggatcaatagatagc
ttttcgctaatttcagatgcagcatatataagtgcaagcttggctcgtataatgcgtgcg
ttatttgaaatatgtctgcggagaggatggtgtgaaatgacttcttttatgttggactac
tgcaaagccgtggatcgtcaaatatggcctcatcagcatcctctacgacagtttgatagg
gaactgtccgcggaagtattgagaaagcttgaagagcgagaagttgacttggatcggctt
ctagagatggaggaaaaagatattggattattgattcgttatgcacatggaggaaagatt
gttaaacaatatttaggatactttccatggatcaacttgtctgctaccataagtcctatc
accagaactgttttaaaggtggacttgctcattacgcctgagtttgtttggaaggatcgc
tttcatggtcttgttcagcattggtggattcttgttgaggattccaagaacgaccacatt
tatcattcggagctcttctctctgacgaagaaaatggcacgaggggagtctcaaaagctt
tcttttacagtgcccatatttgagccacatccccctcagtactacatccgcgctgtgtca
gattcttggttgcatgcagatacttgttacactatctccttccaaaatcttgcgttgcca
gaggctcgtacatcacatacagaacttttggacttgaaacctcttcctgtatcttcactc
ggaaataaggcttatgaggcgctgtacaggttctcacatttcaatccaattcaaactcag
acatttcatgtcctataccacacagacaacagtgttctgttaggggctcctacaggaagt
gggaaaactatatcagctgaacttgcaatgcttcatctcttcaatacacagcctgatatg
aaggttatatatatagcacccttgaaagccattgttagagaaagaatgaaagattggaga
acacgtcttgtgtctcaacttgggaaaaagatggtggagatgactggggattatactcca
gatttaatggccctaacttctgcagacatcataatttccaccccagaaaaatgggatggt
atcagtcgtaactggcacagtagaagctacgttacgaaggttggactcttgatattggat
gagattcacttgctaggagctgatcgtgggcccattctcgaggtcattgtttcgaggatg
agatacgtatcatctcaaacagaacgtgctgttcggtttgtgggcctttcaacggcattg
gcaaatgcatgtgacttggccgactggttgggtgttggggatgctgggttattcaacttc
aagcctagtgtgaggcctgtacctctagaagttcacattcagggatatccagggaagttc
tattgccccagaatgaatagtatgaataaaccagcgtatgctgccatatgtacccattcg
cctacgaagccagttcttattttcgtttcatctcgtcgtcagacaaggcttactgcgctg
gacctcattcagtttgcagcatcagatgagcatcctatacaatttttgaatatgggcgag
gaagcgttgcagatggtactttctcaggtcactgatcagaacttgaggcacactctacag
ttcgggatcggattgcaccatgcaggactgaatgataaagatagatctctggttgaggaa
ctctttgcaaacaacaaaattcaggttttggtatgtaccagcactttagcttggggtgtt
aatcttccagctcatctggtcattattaagggaacggagttttatgatgggaaagcgaag
agatatgttgatttccctattacagatattctgcaaatgatgggtcgtgcaggccgtcct
cagtttgaccagcatggaaaagctgtcattcttgtccatgaacctaaaaagagcttttac
aagaagtttctttatgaaccatttccagttgaaagtaatctgcgcgagcaaatacaagat
cacatcaatgcagaaattgtttctggcacgatttgccacaaggaggatgcagtgcattac
cttacctggacttacctattccgtcgattggttgttaatcctgcttactatgggttggag
gacactgaatcaaaaactctaaattcatacctgtcaagtttggtgcaaaacacatttgaa
gacctggaagatagtggctgtatcaagatgaatgatgacagtgtagagcctttgatgttg
ggttcaatggcatcacagtattacctaagctacatgactgtgtcgatgtttggttcaaac
ataagttctaacacttcacttgaagttttcctgcacatactctctggtgcgtcggagtat
aatgaactgcctgtgcgacataatgaggaaaactataatgaagcattatcaaaaagagtt
ccataccttgtggataacaatagccttgatgacccgcatgttaaagcaaatctacttcta
caggcacatttctcgcagttagagatgccgatcagtgattatgttacagatttgaagtca
gtgcttgaccaaagtatacgtatcatacaagctatgattgatatatgtgctaacagcgga
tggcttacaagcacattaacctgtatgcatctcttgcaaatggtgatgcagggtatgtgg
ttcgaaagggattcttctctattgatgttgccaagtatgaattctgaacttgttagttta
cttggaaaaagaggcatctcaaatgttcagcaactgctgagtcttcccaaggcaactctg
cagtcattaatcgaaaacttccctgtgtcgcagctgtatcaggagttgcagcagtttccg
tatattcatttaaggttaaggcttcaggaaagggatagagagggttttaggtctcgtttt
ctgaacattaaaatggagaaaacaaactacaagcacaaaacaagggctttcacccctcgg
tttcccaagttaaaagacgaagcatggtggctggttcttggaaatgtttctacctcggag
ttatatgcactgaagagggtttctctctcagaccgctcgttggtcactaacatggagata
ccatcctcagtgattagtctccatggagtaaagctgattctagtttcagattgctatctg
gggtttgagcaagaacacccaattgaagagttattaaatccacgcattgaaagataa
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integrated database retrieval system
