Papaver somniferum (opium poppy): 113271971
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Entry
113271971 CDS
T05758
Name
(RefSeq) uncharacterized protein LOC113271971
KO
K10756
replication factor C subunit 3/5
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03030
DNA replication
psom03410
Base excision repair
psom03420
Nucleotide excision repair
psom03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
113271971
03410 Base excision repair
113271971
03420 Nucleotide excision repair
113271971
03430 Mismatch repair
113271971
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psom03032
]
113271971
03036 Chromosome and associated proteins [BR:
psom03036
]
113271971
03400 DNA repair and recombination proteins [BR:
psom03400
]
113271971
DNA replication proteins [BR:
psom03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
113271971
DNA Replication Termination Factors
ELG1-RFC complex
113271971
Chromosome and associated proteins [BR:
psom03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
113271971
DNA repair and recombination proteins [BR:
psom03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
113271971
Check point factors
HRAD17(Rad24)-RFC complex
113271971
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RCF1-5-like_lid
ATPase_2
CalpD_C
AAA_22
RsgA_GTPase
AAA
RuvB_N
nSTAND_NTPase5
AAA_lid_RFC1
DUF3013
Motif
Other DBs
NCBI-GeneID:
113271971
NCBI-ProteinID:
XP_026377677
LinkDB
All DBs
Position
4:9643024..9648569
Genome browser
AA seq
652 aa
AA seq
DB search
MESPFKVDIVKGKVDLNTGGGSVALVDMEILLVSRVGANLFLIPQSLLFALLEFRGLNEI
FVSSNMLIFFLNVMSTKPILLVFQINGSWSQLWRRSEFLGYLFAAPEEPKPSAPVALDAA
STASATQTPQFKILISAMPALIDSTSVISTTITTTTTTTKSSKSQIPPPLNNHVNATHRK
QDHQKPSTTTALTEENLKELRRRQKGEKKYVNSSSSSPYSKGLTDSTLIITRQRGSLAVS
VDRSPTKNSNVSGRSSSSNSSSISSVFVRIQIWSSSCFRNNKNDANGDQSSRKGLSNEPS
SSVYNKTMTTKLASAPSTTNTTRKQVLRVISSNNNEPGFVKKDKSTSPLLMQENKKKLLE
EKFLKERASSSSSVATAIALDDDNGNFVSGEAISLEEREIVVKDKKKMKKNEKKYVWADM
YRPKALKHFICNRDKADYLHNLVKEGEQCSHYIFEGPAGVGKTTMVWAFLREALGVEDLL
TREERKTFELKGEVEPSITVRVKVSSQYVEINLSQLHGYEKHVIAALIRETQSITKTKVK
QKCGPTNCFAIIIHEADKLSRDAQLYIKWLMERNNQGCTKVFFCCSETSRLQHLRSISTV
IQLFPPSNKEIVEVLKFIAEKECIQLQTQLAERIAENSKHNLRQAIRSFEAT
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggagtctccatttaaggttgatatagtgaaagggaaagtagatttgaatactggaggt
ggatcagtagctttggtagacatggagattttgttggtatcacgggtaggcgcaaatctg
ttcttgattccgcagtctcttctcttcgctctcttggaattcagaggtttgaatgaaatt
tttgtttcatctaacatgttaattttttttctaaatgttatgtcgacgaaaccaatcttg
ttggtgtttcagataaatggttcttggagtcagttatggaggaggtcagagtttttagga
tatctctttgctgctcctgaggaaccaaaaccatctgcacctgttgcacttgatgctgct
tcaactgcttctgctactcagaccccccagttcaaaatactcatatctgcaatgccagca
ctcatcgattcaacatcagtgatctccaccaccatcaccaccactactaccaccacaaag
tcatcaaaatctcaaatccctcctccgctaaacaaccatgtcaatgcaacacacagaaaa
caggatcatcagaaacccagcaccacaacagctctgacggaagaaaaccttaaagagtta
agacgtcgtcaaaaaggcgagaagaagtatgtaaacagtagtagcagtagtccttactct
aaaggactaactgattcaactctgattataactcgacaaagaggatcattagctgtaagt
gttgatcgaagtcctacaaaaaatagcaacgtaagtggaagaagttcttcttcaaatagt
tcttcgatttccagtgtgttcgttaggatacaaatatggagttctagttgttttaggaat
aataagaatgatgcaaatggtgatcaatcaagtagaaaaggtctttctaatgaaccatct
tcttcagtctataataaaacaatgacgactaaacttgcgtcggctccatcgacaacaaac
actacgagaaaacaagtgttacgagtgatcagtagcaataacaacgaaccggggtttgtg
aagaaagataagagtacatcgccattactgatgcaagagaataagaagaagctattggaa
gagaagttcttgaaggagagagcatcatcgtcatcatcggtggctacagctattgccttg
gatgatgataatggtaattttgtaagtggagaagcaatttcacttgaagagagagagatt
gtagtgaaagataaaaagaaaatgaagaagaatgaaaaaaaatatgtttgggccgatatg
tatagaccaaaggctttgaagcatttcatttgcaatcgagataaagctgactaccttcat
aatttggtgaaagaaggtgagcaatgcagccattatatatttgaaggtcctgctggagta
gggaagacaactatggtttgggctttcttaagagaagctttaggagtcgaagatttactg
acaagggaagagcgcaagacatttgaattaaagggagaagttgaaccaagtattacagta
cgtgtgaaagtatcatctcaatatgttgaaataaacttatctcaactacacggatacgaa
aagcatgtgattgctgccttaattagagaaacccaatcgatcaccaaaaccaaagttaag
caaaaatgtggtccgaccaactgcttcgcaattattatccatgaagcagacaagttatct
agagatgcacagctttatataaaatggctaatggaaaggaataatcaaggctgcaccaaa
gtcttcttttgttgcagcgaaacttccagacttcaacatctaagatctatttctactgtt
attcaactctttccaccatcaaacaaggagattgttgaagtgttgaagtttatagcggaa
aaagaatgtatccaactgcaaacccaactagccgaaagaattgcagaaaactctaaacat
aatcttcgacaagctattcgatctttcgaagctacatga
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