Papaver somniferum (opium poppy): 113272358
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Entry
113272358 CDS
T05758
Name
(RefSeq) serine/arginine-rich splicing factor SR45-like
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03013
Nucleocytoplasmic transport
psom03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113272358
03015 mRNA surveillance pathway
113272358
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psom03019
]
113272358
Messenger RNA biogenesis [BR:
psom03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
113272358
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
113272358
NCBI-ProteinID:
XP_026377990
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Position
4:37512040..37514985
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AA seq
273 aa
AA seq
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MAKMGFQQLIMIQDKGVNSFQIWLDFKLERSLEPVPTTEGIEREDCQIGSKGVLKHQQRC
IHSSPSSFGSREVPQVLETSMIHICPLPGNMNEGRLKQIFDTFGEVVSVELPLHLLNRDD
AVKARLRMDGEKVDGIVVRVRRVLLPSPPTKVESGSRKRVADAPRGQNNLDSASSSQNPF
SPPRRRSRLTLQRGDFSRPRTDTPWRWVDSSPRRRMDSTVGHPGSPPRRIPASFIRRRSP
SSPPRLYRSPARASLRRGRRSPVRRLSPIIVRR
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atggctaagatgggctttcagcagttgattatgatacaagacaagggtgtgaactcgttt
cagatttggttagattttaagctcgaaagatcacttgaacctgttcctacaacagaggga
atagagagggaagattgccagattggtagtaaaggagtcttaaaacatcagcagagatgt
atccatagttcaccatcatcgtttgggagcagggaagttcctcaggttctcgaaacgtct
atgattcatatttgtcctctccctgggaatatgaatgagggacgacttaagcagattttc
gatacgtttggtgaagttgtaagtgtggaactaccacttcatctacttaatagagatgat
gctgtaaaagcacgtttgcggatggatggtgagaaagttgatgggattgttgtgcgagta
aggcgcgtcttgcttccatcgcctcctacaaaggttgaatctggttcccgaaagagggtt
gctgatgctccacggggacaaaacaatttggattcagcctcttcgtcccaaaatcccttt
tcaccaccacgtaggcgatcccgactaactcttcaaagaggtgacttttctcgaccccga
acggatactccttggcgatgggtggattcttctcctcggcgtagaatggattctactgtt
ggtcatcctggatcccctcccaggaggatacctgcgtcttttatcagaaggcgatctcca
tcctctcctccaaggctgtatagatcacctgcacgtgcttcgctgcgaaggggtcgtcgt
agtcctgttcgtagattgtctcccatcatagttaggcgataa
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