Papaver somniferum (opium poppy): 113272546
Help
Entry
113272546 CDS
T05758
Name
(RefSeq) geranylgeranyl pyrophosphate synthase, chloroplastic/chromoplastic-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom00900
Terpenoid backbone biosynthesis
psom01100
Metabolic pathways
psom01110
Biosynthesis of secondary metabolites
Module
psom_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
113272546
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
psom01006
]
113272546
Enzymes [BR:
psom01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
113272546
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
113272546
2.5.1.29 geranylgeranyl diphosphate synthase
113272546
Prenyltransferases [BR:
psom01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
113272546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
UbiA
Motif
Other DBs
NCBI-GeneID:
113272546
NCBI-ProteinID:
XP_026378154
LinkDB
All DBs
Position
4:complement(55169847..55170909)
Genome browser
AA seq
325 aa
AA seq
DB search
MTCHLRPFKSLKTQVTNSNSSPVEPVILSGAPQKHLELGFQFEEYIIGKAKSVPLRHPLT
IHEAMRYSLLAGGKRVRPILAIASCELVGGNEEIGLPIACAVEMIHTMSLIHDDLPCMDN
DELRRGKPTNHIVFGEETAVLAGDALLALSFEHVATRLAKVVSADSVVRAIAELGAAVGS
DGLVAGQIVDIKSEGREVNLNDLEHIHVHKTGKLLEASVVCGAIIGGGNEMEVERLRRYA
RCVGLLFQVVDDILDVTRTSDELGKTAGKDLATDKAMYPRLMGIEKAKEFADGLVTKAKE
ELSYFDETKARPLYHLANYIAYRQN
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgacttgccatcttcgacccttcaaatctttgaagacccaagttacaaattcaaattca
tccccagtagaacctgttattctgtctggagccccacaaaaacatctagagttaggattt
cagtttgaagaatacatcattggaaaagcgaaatcagttcctttgagacatccattgaca
attcatgaagccatgagatattcactacttgcaggtgggaaacgggttcgtccaattttg
gcaattgcttcatgtgaattagtaggaggaaatgaagaaattggtctgccaattgcttgt
gctgtagagatgattcacacaatgtcgttgattcacgacgatcttccgtgcatggataac
gatgagctgagacgtggaaagcctacaaatcatatagtttttggtgaagaaacagcagtt
cttgctggtgatgctcttctcgctctatctttcgagcatgtcgctactcgattggcaaaa
gttgtgtcagcggacagtgtggttcgggccatagcagagttaggtgcagcagttggttca
gatgggttagttgcaggtcaaattgtggacataaaaagtgaaggaagagaagtaaatttg
aatgacctggagcatatacatgtgcacaagactggtaaactcctggaagcttctgtagta
tgcggagccataatcggaggtggaaatgaaatggaagtagaaagattgagaagatatgca
agatgtgttggcttgctatttcaagttgttgatgatattctggatgtaacaagaacttca
gatgaactggggaaaacagcagggaaagatttggctactgacaaggcaatgtaccctagg
ttgatggggattgagaaagccaaagaatttgcagatgggttagtgacgaaagctaaagag
gaactctcttattttgatgaaaccaaggctaggcctttataccatttagctaactacatt
gcctacaggcagaattag
DBGET
integrated database retrieval system
