KEGG   Papaver somniferum (opium poppy): 113273412
Entry
113273412         CDS       T05758                                 
Name
(RefSeq) UBP1-associated protein 2B-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
psom  Papaver somniferum (opium poppy)
Pathway
psom03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:psom00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113273412
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psom03019]
    113273412
   03041 Spliceosome [BR:psom03041]
    113273412
Messenger RNA biogenesis [BR:psom03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     113273412
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     113273412
Spliceosome [BR:psom03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    113273412
SSDB
Motif
Pfam: RRM_1 RRM_7 Cut8 DUF5509
Other DBs
NCBI-GeneID: 113273412
NCBI-ProteinID: XP_026378946
LinkDB
Position
1:complement(29173668..29175568)
AA seq 445 aa
MAKNEEDSEPETDSEEEDITKLLEPFTKQQLISIIHSISTKNTKIFSEIQQIADKNPSHL
KIFIHGLALETTPDNLKQIFSSYGEIEDCNVVIDNKGKFLTSRRCYGFILYKHRKSVTKA
LKKTIKNIGSRITACNLASSGPIHIPQWAMREEILQRKIFVGNVNNSHFEITAEKLYRFF
SKYGEIEEGPFGFDKYTGEPKGYALFIYKTVDGVRKALEEPVKNFNGHPLYCEIATCCYM
NKQKLGSYEERKSGSDSFSTENFTSKSDLYNAPKMPSAGRIPNVGALGMRKQKSGTSSEN
LTSKNDGYNAPKMPCAGRKPRVGDFGIRNRVGETRRYQGNISAQIGPSGHGHVMRPALVR
TRFVLFSLHFILPAFSGVTVVIYGPVLYLFSVTFEPTFKLRSTECIGSVLSISDAVRSLK
VNIKLDGLGLLEVSFTCALRRILIN
NT seq 1338 nt   +upstreamnt  +downstreamnt
atggcgaagaatgaagaagattcagaaccagaaacggattcagaagaagaagacattaca
aaacttcttgaaccatttactaaacaacaattaatttccattattcattcaatctcaaca
aaaaacacaaaaatcttttcagaaattcaacaaatcgcagataaaaacccatctcatctt
aaaattttcattcatggactcgctctagaaaccacaccagataatctcaaacaaattttt
tcaagttacggtgaaattgaagattgtaatgttgttattgataacaaagggaaattcctc
acatcaagacgttgttatggattcatattatacaaacacagaaaatctgtgactaaagca
ttaaaaaaaacgattaaaaatattgggagtcgaattacagcttgtaatttagcttcttct
ggacctatacatattcctcagtgggcaatgcgagaagaaattctgcagaggaagatcttt
gtaggtaatgttaacaattctcattttgaaattactgctgaaaaattgtataggtttttt
tctaagtatggggaaattgaggaaggtccatttggatttgataaatacactggggaacct
aaaggctatgctttgtttatatataaaactgttgatggagtaagaaaggctttggaagaa
cctgttaagaactttaatggacatccactatattgcgaaatagctacttgttgttatatg
aataagcagaaattgggttcttatgaggagcgaaaatctggttctgattctttttccact
gaaaattttacttccaagagtgacttgtataatgcacctaagatgccatctgctggtagg
attccaaatgtgggagctcttggaatgaggaagcaaaaatctggtactagttctgaaaat
ttaacctcgaagaatgatgggtataatgcacctaagatgccatgtgctggtaggaaacca
agagtgggagattttggaatacggaatcgggttggtgaaacacgacgttatcaaggtaat
atttcagcccagattggaccttctggacatggtcatgttatgagacctgcattggtgcgg
acaagatttgttctcttttccttgcacttcatcctgccagcattttctggggtaactgtc
gtaatatatggtccagtcctctacttgttctctgttacatttgaacctacgtttaaactt
cgtagtacagaatgcataggttccgtactctccatcagtgatgcagtaagaagcttgaag
gtcaatatcaagttggatggtcttggactcttggaggtatcattcacttgcgcattgagg
agaatcctcattaactaa

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