Papaver somniferum (opium poppy): 113274018
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Entry
113274018 CDS
T05758
Name
(RefSeq) transcription factor PRE3-like
KO
K28364
atypical basic helix-loop-helix transcription factor protein
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psom03000
]
113274018
Transcription factors [BR:
psom03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
113274018
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Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_ILI
HLH
DUF1804
DUF948
Adenylsucc_synt
Vac17
HOOK
ACF4_like
SBP_bac_4HB
bZIP_1
Syntaxin
Ninein_long_CC
bHLH_IRO3
GOSR1_N
CaMBD
bHLH_NPAS4
Cyanophycin_syn
PCRF
Motif
Other DBs
NCBI-GeneID:
113274018
NCBI-ProteinID:
XP_026379354
LinkDB
All DBs
Position
4:79472742..79473747
Genome browser
AA seq
97 aa
AA seq
DB search
MSSRRSRSSRQSSGVSRISEDQINDLVIRLQQLLPELRNTNNRTSDKVSASRVLQETCNY
IKSLHREVDDLSERLTELLSTSDTSNAQAAIIRSLLM
NT seq
294 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagcagaagatcacgttcgtccagacagtcatcaggtgtttccaggatcagcgag
gatcaaatcaatgatctcgttatcaggttacaacagcttcttcctgagcttcgcaacact
aacaacagaacctcagacaaggtatcggcttctagggttttgcaagagacatgcaactat
atcaaaagcttacacagagaagttgacgatcttagcgagcgtctaacagagttattgtca
acctcagatactagtaatgctcaagcagctataattaggagccttcttatgtaa
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