Papaver somniferum (opium poppy): 113274430
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Entry
113274430 CDS
T05758
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4-like isoform X1
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psom04121
]
113274430
Enzymes [BR:
psom01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113274430
Ubiquitin system [BR:
psom04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113274430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-RING_2
zf-RING_UBOX
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-C3HC4_4
Prok-RING_4
zf-rbx1
Rtf2
zf-RING_10
zf-ANAPC11
TRAF3_RING
zf-RING_6
zf-RING_4
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
113274430
NCBI-ProteinID:
XP_026379606
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Position
4:complement(159727035..159731080)
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AA seq
200 aa
AA seq
DB search
MADVLVTMANIFRRAAAALVRSSQQGGGAGIVQSPTIDVEEVIDDDDEVVITSPTSFAQA
RRNREATITAERPPPSDDGSRLTQSSRYNLRKRPAPSDAVISADQYINLDGRRNSKKKRA
VKPLVTPQAAPPKPLPKEPAFGCPVCMCSLVEATSTNCGHIFCKLCIQAALSARSKCPVC
RKELSMKDTIRVYLPATELS
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgtcttggtaaccatggcgaatatttttcgaagggcagcggctgctttggtt
aggagtagtcaacaaggaggaggagcagggatagtgcaatcaccaacaattgatgttgaa
gaagttattgatgatgatgatgaagttgttattacatctccaacaagctttgctcaagcg
agaaggaatcgggaggcgacaattactgccgagagaccaccacctagtgatgatggatct
aggttgactcagagtagccgctacaacttgcgcaaaaggcctgcaccaagtgatgcagtt
atcagtgctgatcagtacataaacctagatggaagaagaaattccaagaaaaagcgtgct
gtgaaacctctggtaacaccccaggctgcgccaccaaagccattgccaaaggagcctgca
tttggttgtccagtttgcatgtgttcacttgtggaggcgacatcaacaaactgtggccac
attttctgcaaactgtgcatccaggccgctttatcagctcgtagtaaatgtccagtatgt
agaaaagagctctcgatgaaagatactatcagggtctaccttcctgccaccgaattgagc
tga
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