Papaver somniferum (opium poppy): 113274754
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Entry
113274754 CDS
T05758
Name
(RefSeq) serine/arginine-rich splicing factor SR45a-like
KO
K12897
transformer-2 protein
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113274754
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
psom01009
]
113274754
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psom03041
]
113274754
Protein phosphatases and associated proteins [BR:
psom01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
113274754
Spliceosome [BR:
psom03041
]
Common components
Common spliceosomal components
SR proteins
113274754
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
113274754
NCBI-ProteinID:
XP_026379925
LinkDB
All DBs
Position
4:12674385..12676964
Genome browser
AA seq
237 aa
AA seq
DB search
MSHAREGRSISRSLTPPPSRIRRRSLSPSPTRLRRSRSRSRGRSRSRSREPGEVVNPGNN
LYVTGLSTRVSTSDLEKHFSTEGKIAECHLVTDPRTRESRGFAFIMMETVEDADRCIKYL
NRSVLEGRLITVEKAKRKRGRTPTPGRYQGVKDKRGGFGGDRGDHGPIGGRRRSRSYSPR
GRPSRDVRDFRDVRDGPPYFRNHRERSPPRYPPLPYSRPRSPYGRRGEDYPLYERRR
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgtcacatgcaagagaaggaaggtctatatctcgttctcttactccaccacccagtaga
attcgtagacgatctctgtctccttcaccaactagacttcgtaggtcaagatcaaggtca
agaggaaggagtcgctccaggagccgtgaacctggagaagttgttaatccgggaaataac
ttgtatgtaactggcttatccactagggttagcacaagtgatctcgagaagcatttcagc
actgaaggaaagattgcggagtgccatttggttactgatcctcgcaccagggagtctcgt
ggatttgcgttcattatgatggaaactgttgaggatgctgatcgttgtatcaagtatctt
aaccgctcagttctcgaaggccgcctgattacagttgagaaggcaaaaaggaaacggggg
agaaccccaaccccaggaagataccaaggtgtaaaagataaaagaggaggttttggtggt
gatcgtggtgatcatggacccattggtggtcgccgaagatcacgtagttattcacctcgt
ggaagaccatccagagatgtcagagattttagggatgttagagatggacctccttatttc
aggaatcatcgagagcgatctccacctcgttatcctcctcttccatattctcgtcccagg
tctccctatggtaggaggggagaggattatcccttgtatgagagacgcaggtaa
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integrated database retrieval system
