Papaver somniferum (opium poppy): 113275043
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Entry
113275043 CDS
T05758
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psom03009
]
113275043
03036 Chromosome and associated proteins [BR:
psom03036
]
113275043
Enzymes [BR:
psom01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113275043
Ribosome biogenesis [BR:
psom03009
]
Eukaryotic type
Pre-60S particles
Helicases
113275043
Chromosome and associated proteins [BR:
psom03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
113275043
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
Soyouz_module
Motif
Other DBs
NCBI-GeneID:
113275043
NCBI-ProteinID:
XP_026380259
LinkDB
All DBs
Position
4:complement(29647609..29652336)
Genome browser
AA seq
709 aa
AA seq
DB search
MPSIALSDINFMDEVKEKKIKKEKKIKLEVENGGTDNGTPAASPSSEKKKSKKISDDSDD
SMKGASTEKKKKKKRKADEEGQEDAGEIENGSASVVENGTVKKSKKQKGNDGAAVVKDDV
EKEDPNALKNFRISAPLKAKLEANNIKALFQIQTMTFNDVLDGFDLVGRARTGQGKTLAF
VLPILESLINGPTKDSRRTGYGRSPSVLVLLPTRELAHQVAADFELYGKSLGLTTCCVYG
GSPYGPQEGALRRGVDIVIGTPGRIKDHVERGNLDFGSLKFRVLDEADEMLDMGFLDDVE
LILGKVKDLKTVQTLLFSATLPPRIKNITTRFLKPDKKIVDLVGNEKIKASVNVRHIVMP
CSRDARATVIPDVIRCYGSGGKVIVFTETKGCASDLSGILPGARALHGDIQQATREVTIA
AFRAGKFMTLVATSVAARGLDINDVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLY
DPRKHNISRIEKDAGVKFEHISAPQATDIATSVAHEISAAILEVSDSVIPAFQSAAEQLI
KTSGLSPVDLLSKALAKASGYTEIKSRSLLNSMENYVTVQLDAGKPVYSPSFVFGVLRRF
LPENQVEAVKGVTLTADGRGAVFDVPTADLDAYLAGQENAANVSIEVLKELPKLQEKEGG
NNRFRGGGGRGYGGGGRGYGGGGGRGRGGGGSWGGDRRGGGGGGGRWGR
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgccttcaatagcactttctgatatcaacttcatggacgaagttaaagagaagaagatt
aagaaagagaagaagattaagctagaagtagaaaatggcggcaccgataatggaacccca
gcagcttctccttcatcagagaagaagaaaagtaagaaaatttctgatgatagtgatgat
tccatgaaaggggcatctacagagaagaaaaaaaagaaaaagaggaaagctgatgaagaa
gggcaggaggatgctggtgaaattgaaaatgggtctgcgtctgttgttgagaatggaact
gttaagaaatctaagaaacagaaagggaatgatggagctgctgttgttaaagatgatgtc
gaaaaagaggatcctaatgcactgaagaattttaggatctctgcaccattgaaagccaag
ctggaagctaataatattaaagcactttttcagattcaaactatgacttttaatgatgtt
cttgatgggtttgatttagtcggtagagctcgtactggtcagggaaaaactcttgcattt
gtgttgccaatattggaatccttaattaatggtcccacaaaagattcacggaggacaggt
tacggaaggtccccaagtgttctggttcttttacccacaagggaattggcacatcaggtg
gctgccgactttgagttatatggtaaatcacttgggttaactacctgctgtgtatatggt
ggatctccttacggtcctcaagaaggtgcactgagaaggggggttgatattgttattgga
actcctggaagaataaaggatcatgtcgagaggggaaaccttgactttggctcattaaag
ttccgtgtacttgatgaagctgatgagatgcttgacatgggttttcttgacgatgttgaa
cttattctcggaaaggttaaagatttgaagacagtccagacactcctcttcagtgctaca
ttaccaccaaggattaaaaatattactactaggtttttgaaacccgacaagaagattgta
gaccttgttggaaatgagaaaataaaggccagtgtaaatgttaggcatattgtcatgcca
tgctctagagatgccagagcaacagtcattcctgatgtaattcgctgttatggcagtggc
ggcaaggtaatagtttttactgagaccaagggttgtgcttctgacctttctgggatattg
cctggagcgcgtgctttgcatggagatattcaacaagccacccgtgaggtcacaatcgct
gctttcagggccggcaagttcatgactttagtagccaccagtgtggcagcccgtggtttg
gacatcaatgacgtccagttaatcattcagtgtgaacctccacgagatgtagaagcttac
attcatcgttctgggcgtactggaagggctggcaacactggagttgctgtaatgctttat
gatccaaggaagcataacatctctagaatagaaaaagatgctggtgtgaaatttgagcac
atatcggctcctcaagccaccgatattgcaacttctgttgctcatgagatatctgcagca
atccttgaagtttccgacagtgttattccagcatttcagtcagcagctgagcagctcatt
aaaacctctggactctctcctgttgaccttctttcaaaggcccttgccaaagcatctggg
tatactgaaataaagagtaggtcgcttcttaattccatggaaaactatgttaccgtacaa
ctcgacgctggaaaaccagtctattcaccatcgtttgtgtttggcgttctgaggagattc
ttgcccgaaaatcaggttgaagctgtgaaaggtgtaactcttacagcagatgggaggggt
gcagtgtttgatgtgcctactgcagatctagatgcatatcttgctggtcaggaaaatgca
gcaaatgtgagtattgaagttctgaaagaattgcccaagttgcaagagaaggaaggcggc
aacaatagatttagaggtggtggcggtagaggatatggtggcggcggtagaggatatggt
ggtggcggcggtagaggaagaggaggtggtggtagctggggaggagatcgaagaggaggt
ggcggcggcggcggcagatggggaaggtaa
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