Papaver somniferum (opium poppy): 113275259
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Entry
113275259 CDS
T05758
Name
(RefSeq) probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psom03009
]
113275259
Enzymes [BR:
psom01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
113275259
Ribosome biogenesis [BR:
psom03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
113275259
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
TRM5-TYW2_MTfase
RsmF-B_ferredox
FtsJ
Methyltransf_31
Motif
Other DBs
NCBI-GeneID:
113275259
NCBI-ProteinID:
XP_026380516
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All DBs
Position
4:41417706..41423512
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AA seq
489 aa
AA seq
DB search
MELDTDEFRLPTKEELEEEKLRPDLTNLQRRIKEIVRVLSNFKGLRKEGLSRKDYVEQLQ
LDLSSYYGYNEFLIGVLVEIFPVVELLELIEAYEKPRPICLRTNALKARRRDLADVLLNR
GVNLDPLSKWSKVGLVVYDSQVPIGATPEYMAGYYMLQSASSFLPCMALAPQENERVVDM
AAAPGGKTTYVAALMKNSGIIYANEIKESRLKSLTANLQRMGVTNTIVSNYDGKELPKVL
GMNTVDRVLLDAPCSGTGVISKDESVKASKSLEDIQNCVFLQKQLILAAIDMVDANSKSG
GYIVYSTCSIMIPENEAIIDYALKKRDVQLVPCGLDFGRPGFTRFREHRFHPSLDKTRRF
YPHVHNMDGFFVAKLKKMSNMKQPPKSSEPSETVEQAPEPVDGSTDEKVQPEVKSQQPKD
FSGPKEGKDTIEVNNRSNNPSKPKERRPKRKFPSREEIAQAREEKRKALREEKPRTKKIK
GDGKEKRNT
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggaattggataccgatgaatttcggctgccaactaaagaggaacttgaagaggagaag
cttaggcccgatcttaccaatcttcaacgaagaataaaagagattgttcgcgtgctttcc
aattttaagggtttgaggaaggagggactgtcgaggaaggattatgttgagcaacttcag
ttggatttgagttcttactatggctacaatgagttcctgattggtgttcttgttgagatc
ttcccagtagttgaacttctagagcttattgaagcgtatgaaaagcctcgacccatttgc
ctaaggacaaatgccctgaaggctcggagacgggatttagctgatgttttgttaaacaga
ggagtaaatctggatccattaagcaagtggtcaaaggttggactggtcgtatatgactct
caagttcccatcggtgccactccagagtacatggctggttactacatgctgcaaagtgca
agctcctttttaccatgtatggcccttgctcctcaagaaaatgaaagggtggtagatatg
gctgccgcacctggtggtaaaacaacttatgttgcagctcttatgaagaacagtggaatt
atttatgcaaatgagataaaggaatctagactcaagtcacttactgcaaatttgcaacgg
atgggagtgactaacaccattgtctctaactacgacgggaaggagctccccaaggtattg
gggatgaacactgttgatcgagtgttactggatgcaccttgcagtgggactggagttata
tctaaagatgaatcagttaaagcatcaaaaagtttggaagatatacaaaattgtgtgttc
ttgcagaagcaactgatccttgcagccattgatatggtggatgctaattccaaatctggc
gggtacatagtttactcaacttgctctataatgattccagagaatgaagcgataatagat
tatgccctcaagaagagggatgtacaactcgtgccatgtggtttagattttggacgccct
gggtttactcgctttagagagcaccggtttcacccctcattggacaagactaggcgtttt
taccctcatgttcataacatggatggtttttttgtggccaagttgaaaaagatgagcaat
atgaagcaaccacccaaatcatcagagccatcagagacagtagaacaggcgcctgaacct
gttgatggcagcactgatgagaaagtccagccagaagtaaaatcccaacagcctaaggat
tttagtggtcctaaggagggcaaagacaccattgaagtcaataataggagcaataaccca
tcaaagcccaaggaacggaggccgaaaaggaaatttccatctagagaagagatagcccaa
gccagagaagagaaaaggaaagccctgagggaagaaaaacccagaaccaagaaaattaag
ggtgatggaaaagaaaagcgaaatacttaa
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