Papaver somniferum (opium poppy): 113275326
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Entry
113275326 CDS
T05758
Name
(RefSeq) uncharacterized protein LOC113275326
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
113275326
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psom03021
]
113275326
03400 DNA repair and recombination proteins [BR:
psom03400
]
113275326
Enzymes [BR:
psom01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
113275326
Transcription machinery [BR:
psom03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
113275326
DNA repair and recombination proteins [BR:
psom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
113275326
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_S11
RNA_pol_A_bac
RNA_pol_L
RNA_pol_L_2
PI3K_1B_p101
Motif
Other DBs
NCBI-GeneID:
113275326
NCBI-ProteinID:
XP_026380593
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All DBs
Position
4:44608569..44614899
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AA seq
359 aa
AA seq
DB search
MAKPIPRVGSRRNGRISSRKTGRRIPKGVIHVQASFNNTIVTVTDVRGRVVSWSSAGTYG
FRGTRRGTPFAAQTAAGNAIRTVVHQGMQRAEVMIKGLGLGRDAALRAIRRSGILIKFIR
DVTPMPHNGCRPPKKRQEVAVSTRTLQWKCVESRADSKRLYYGRFILSPLLKGQDDTIGI
AMQRALLGEIEGTCITRAKSDKIPHEYSTIVGIEESVHEILMNLKEILLRSNLYGTRDAS
ICVRGPGYVTAQDIISPPSVEIVDTTQHIASLTEPMDLCIGLQIERNRGYRMKTPNNAQD
GSFTIDAVFMPVRNANHSIHSYGNGNEKQEILFLDIWTNGSLTPKEALHEASRNLIDLF
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacctataccaagagttggttcacgtaggaatggacgtattagttcacgtaag
actggacgtagaataccaaaaggagttattcatgttcaagcaagtttcaacaataccatt
gtaacggttacagatgtacggggtcgggtggtttcttggtcctccgccggtacttatgga
ttcaggggcacaagaagagggacaccgtttgctgcccaaaccgcagcaggaaacgctatt
cgtacagtagtccatcagggtatgcaacgagcagaagtcatgataaaaggtcttggtctc
ggaagagatgcagcattacgagccattcgtagaagtggtatacttattaagttcatacgg
gatgtaacccctatgccacataatggatgtagacctcctaaaaaaagacaggaagtagca
gtatctactcggacactacaatggaagtgtgttgaatctagagcagacagtaagcgtctt
tattatggccgttttattttgtctccgcttctgaagggtcaagacgatacaataggcatc
gcgatgcaaagggctttgcttggagaaatagaaggaacatgtatcacacgtgcaaaatct
gataaaataccacatgagtattctactatagtaggtattgaagaatccgtacatgaaatt
ttaatgaatttgaaagaaattttattaagaagtaatctatatggaactcgcgacgcatcc
atttgcgtcaggggtcctggatacgtaactgctcaagacatcatctcaccgccttctgtg
gaaattgttgatactacacaacatatagctagcttaacggaacccatggatttgtgtatt
ggactacaaattgagagaaatcgtggatatcgtatgaaaacaccaaataatgcacaagat
ggaagttttactatagatgcagtattcatgcctgttcgaaatgcaaatcatagtattcat
tcttatgggaatggaaatgaaaaacaagaaatactttttctagatatatggacgaatgga
agtttaactcctaaagaagcacttcacgaggcttcccgtaatttgatcgatttattt
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