Papaver somniferum (opium poppy): 113275367
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Entry
113275367 CDS
T05758
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23-like
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psom03021
]
113275367
Transcription machinery [BR:
psom03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
113275367
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
113275367
NCBI-ProteinID:
XP_026380638
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All DBs
Position
4:complement(46656867..46668129)
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AA seq
1610 aa
AA seq
DB search
MDQIQRGVGGAPPSRAHHFHPSRNPIADLFNLYLGRNLRQKTEDVIRESPNKSQKRITAF
NRDLPPRNEQFVSDFEQLQAQFPDQEQLRAVTESVLITLVVQCSSHTPRAEFLLFALRSL
CTMGYVNWDTFLPSLLSSVSAAETSIGQTSHQAASSSLASSGLTHIGMMQSSSAVPNSTF
HSTNPASPLTSMHGIGSPAQSASEPSTTMSPIKSSTFASTGQKIVSRTNPSLRDSAVSCL
RQLSCKIILAGLESNLKPVTHADIFTHMLNWLVNWDQRTQVNETDGLKAWKPDRSLNDWL
HSCLDVIWLLVDADKCRVPFYELLRSGLQFMENVPDDEALFTLILEIHRRRDMVAMHMQM
LDQHLHCPTFGTHRLMTQAYPSVSGESAASLRYSPITYPSVLGEPLHGEDLATSIQKGNM
DWERALRCVRHALRTSPSPDWWRRVLLMAPCYKSNAQGSTPGAVFSSEMISEATIERTVE
LLKMTNSDTHFWQEWLIFSDIFFFLMKSGCIDFLDFVDKLASRVLKGDHQILQSNHVTWL
LAQIIRIEIVTNALNSDPRKVESTRKILSFHKEDRNSDPNNVTPQSILFDFISSSQTLRI
WSFNTSIREYLNHEQLQKGKQIDEWWKQVTKGERMLDYMNLDDRSIGMFWVLSYTMAQPA
CEAVMNWLTSSGVTELLPGSNVQSNERVMVMREVCPMPMSLLSGLSINLCLKLGYQLEES
MFFNQVIPSISMVETYVRLLLVAPNSLFRVHFTNLATRNPAILNKPGVSLLLLEILNYRF
LPLYRYHGKSKALMYDVAKIIAMLKGRRAEHRVFRLAENLCMNLILSLRDVFLVKKDLKG
PTEFTETLNRMTIISLAITIKTRGIAEVEQMVYLQPLLEQVMATSQHTWSEKTMRHFPPV
IREALLGRMDKRGHAIQAWQQAETTVINQCTQLLSPSADPSYVLTYINHSFPQHRQYLCA
GAWILMHGHPESINSANLGRVLREFTPEEVTSNIYTMVDVLLHHIHMEMQHGHLQQDLLA
KASANLTFFIWTHELLPLDILLLALIDRDDDPNALRIVMALIDKQELQQRIKLFCMNRGP
PEHWLHSGIFKRVELQKALGNHLSWKERYPPFFDDIAARLLPVIPLIVYRFIENDAHDVA
ERFLAAYSALLAYHPLRFTFVRDILAYFYGHLPSKLIVRILNVLDLSKIPFSESFPRHIS
SSNPATCPPPDYFATLLLGIVNNVIPPLNNKSKSGAMGDTANNSRTAYNRTQAPSHSGPI
NASEVQKPFYQIQDPGTLTQLYLETAAIELLSLPASPSQIVTALVNIVVHFQPTLIQSSS
GLQGTSSGVSQGSVLPNSPTAGSTDSMNTSRSNPSTIGINTSNFVSKSGYTSQQLSCLMI
QACGLLLAQLPPDFHVQLYVEASRIIKECWWLTDGKKSVKELDSAVGYALLDPTWAAQDN
TSTAIGNIVALLHSFFSNLPQEWLEGAHAIIKHLRPVSSVAMLRIAFRILGPLLPRLAFA
RPLFMKSLALLFNLMADVFGRNSQPSTPTEASDIADLIDFLHHAVLYEGQGGPVQSTSKP
KIETLALCGKLMELLRPDVQHLLSHLRTDPMSSVYAATHPKVVSQNPPQY
NT seq
4833 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaattcaaagaggagtaggaggagctcctccttccagagctcaccactttcac
ccatctcgaaatcctatcgctgatctcttcaacctctacctcggtaggaatttgcggcaa
aagactgaagatgtaatcagagaatctccaaacaagtctcaaaagaggataactgctttt
aaccgggaccttcctcctcggaacgaacagtttgtttctgattttgaacaacttcaggcc
cagtttccggaccaggagcaattgcgagcagttacagaatctgtccttattactttggtt
gtgcaatgtagtagtcacacaccgcgggcggagtttcttctgttcgcgttgcgtagcttg
tgtaccatgggttatgtaaattgggacacattcttgccatctctcctttcttcagtttcc
gcagcagagacatccattggacaaacaagtcatcaagcagcatcaagtagccttgcgtct
tcaggtttgacacatattggaatgatgcaatcatcaagtgcagttcctaactccactttt
cattccacaaatcccgcgtctcctttaacctcaatgcatggcattggatctcctgctcag
tcagcgtcagaaccatctacaactatgtcacccatcaagtcttcaacttttgcctccact
gggcagaaaattgtttctaggacaaatccttcactaagagattctgctgttagctgttta
cgtcagttgtcatgtaagatcattttggctggccttgaatccaatttgaagccagttaca
catgctgatattttcacccacatgctgaattggttagttaattgggatcaaagaacccag
gttaatgaaactgatggactaaaagcttggaaaccagatcggtctctgaatgactggctg
cacagttgcttagatgtaatttggctgttggttgatgcagataaatgtagggttccgttc
tatgaattgcttcgcagtggcctgcagtttatggaaaatgtacctgatgatgaagccttg
tttactctgattttggagatccataggagacgagatatggtggccatgcacatgcaaatg
ttggatcagcaccttcactgcccaacatttggtactcatcgattaatgactcaagcttat
ccaagtgtatcaggtgaatcagcagctagcttgcgttattctcccatcacatatccgagt
gtactaggagagcctttgcatggagaggatctagcaacctccatccaaaaaggaaatatg
gactgggaaagagctcttcgttgtgtaagacatgctcttcgaacatccccatcacctgac
tggtggagacgtgtgctacttatggctccctgttataaatctaatgctcaaggatcaact
cctggtgctgttttctctagtgagatgattagcgaggcaaccatcgagagaacagttgaa
ctgttgaagatgacaaattcagatacacatttctggcaagagtggcttatattttcggat
atatttttctttctcatgaagagtggttgtattgattttctcgattttgtggacaagctt
gcttctcgagttctgaagggtgatcatcagattcttcagagcaatcatgtgacgtggctg
ctggcacaaattattcgaattgagattgtgacaaacgccctaaactcagaccccagaaag
gtggagagtaccagaaagattctatcttttcataaagaggatagaaactcagatccgaac
aacgttacccctcaaagcatcctgtttgattttataagcagtagtcagactttacgtatt
tggtctttcaacacttcaattagagagtatttgaatcacgagcagcttcaaaagggcaag
cagatagatgagtggtggaagcaagtaacaaaaggagagcgtatgcttgactatatgaat
ttggatgataggtcaattggaatgttttgggttctgtcatatacaatggcacagcctgct
tgtgaagcagttatgaattggttgacctcatctggagtaacagaattgttaccaggatca
aatgtgcagtccaatgagagggtaatggtgatgcgagaagtttgccccatgccaatgtca
ctattatctggtctttccatcaacctatgtcttaaactcgggtatcagctcgaagaatct
atgttttttaatcaggttattccgagcatttcaatggttgaaacgtacgtcagattgctt
ctagttgcgcctaattcattatttagagtgcattttacgaatttggcgacgaggaatcca
gccatactaaacaagcctggcgtatccctactcctgctggaaatactaaactaccgcttc
cttccactttataggtatcatgggaagtccaaggcattaatgtatgacgttgcaaaaata
attgcgatgctaaagggaagacgagcagagcatcgcgtattcagattggctgaaaaccta
tgcatgaacctcatcttgtcactacgagatgtgtttttggtgaaaaaagatttgaagggt
ccaaccgaattcacagaaacattgaataggatgacgataatcagtcttgctattactatc
aagacccgtggtattgccgaagttgagcaaatggtttaccttcaaccgcttttggagcaa
gtaatggcaactagtcagcatacttggtcagagaagacaatgcgccatttccctcctgtt
attcgtgaagctttattgggacggatggacaaaagagggcatgccattcaagcttggcaa
caggcagaaacaactgttattaaccaatgcacacagcttctgtcaccctctgctgatcca
tcttatgttctgacttacattaaccatagttttcctcaacatcgacaatatctatgtgct
ggtgcttggattcttatgcatggccaccctgaaagcattaatagtgcaaacctcggacgt
gtcttgagagaatttacgcccgaagaagtgacatctaatatttacactatggttgatgta
cttcttcatcatattcatatggaaatgcaacatgggcatctccaacaggaccttctagca
aaagctagtgccaaccttacgttttttatatggacacatgagctacttccattagatatc
ttgctgctagcacttattgaccgtgatgacgaccctaatgctttgcggatagtgatggct
ctgattgataagcaagagcttcaacaaagaatcaaattattttgtatgaaccgtggcccc
cctgagcattggcttcactcaggaattttcaagcgtgtcgagttgcagaaagctcttggg
aatcatctctcttggaaggagcggtacccacccttctttgatgatattgcagctcgcttg
cttccagtcattcctttaattgtttacaggtttattgagaatgatgctcatgatgtggcc
gagaggttccttgctgcttattctgccttgctcgcctaccacccattgaggttcacattt
gtcagagatattcttgcctatttctatggtcatcttccaagcaagttgatcgtgagaatt
ctaaatgtactcgatctttccaagatcccattctccgaatcattccctcgtcacattagt
tcatcaaatcctgcaacatgcccaccgccagactattttgctactctcctgttgggaata
gtaaacaatgttattccccctctaaataacaaatccaaatctggagcaatgggagacacc
gcaaacaattctcggaccgcatataacagaacccaagcaccatcgcattcgggcccgata
aatgcttcggaggttcagaaaccattttatcaaattcaagatcctggcacgcttacccag
ctttatcttgaaacagcagcaattgaactcctctcactaccagcgtcgccttctcaaata
gtaactgcacttgttaatatagtcgtgcattttcaacccacactaattcagtctagtagc
ggtcttcaaggaacatcaagtggtgttagtcaaggatctgttttaccaaactcacctaca
gctggaagcacagactccatgaacacaagccgatcgaatccctcaactataggaatcaac
accagcaactttgtttcaaaaagtggttatacgagccaacaattatcctgtttgatgatc
caagcttgtggtcttctattagctcagttacctccggattttcatgtgcaactttatgta
gaggcatcacgtataattaaagagtgttggtggctcactgatgggaaaaagtcagtgaag
gagctagattctgctgttggatatgctttgctagatccaacatgggccgctcaagataac
acatcaacagccataggtaatatagttgccctcctgcattctttctttagtaaccttcct
caggaatggcttgaaggggcacatgcaattattaagcatcttagacctgtctcgtctgtt
gcaatgttgaggatagcattccgtatacttggtcctttgctccctcgtcttgcctttgcg
cgcccactatttatgaagtctctggctttgctattcaacttaatggcggatgtcttcggg
agaaactcacagccttctacacccacggaagcctcagacatagcagatcttatcgatttc
ttacaccatgcggttctatatgaaggacagggaggaccggtgcagagtactagtaaacct
aaaatagagaccctagctctctgtgggaagttaatggaacttttaaggcctgatgttcaa
caccttctttctcaccttcgaactgatcccatgtcttccgtttatgctgctactcatccg
aaggtggtgtctcagaatcctcctcagtattaa
DBGET
integrated database retrieval system
