Papaver somniferum (opium poppy): 113275639
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Entry
113275639 CDS
T05758
Name
(RefSeq) transcription initiation factor TFIID subunit 2-like isoform X1
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
113275639
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
psom01002
]
113275639
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psom03021
]
113275639
03036 Chromosome and associated proteins [BR:
psom03036
]
113275639
Peptidases and inhibitors [BR:
psom01002
]
Metallo peptidases
Family M1
113275639
Transcription machinery [BR:
psom03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
113275639
Coactivators
SAGA/TFTC/STAGA complex
113275639
Chromosome and associated proteins [BR:
psom03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
113275639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M1
HEAT_2
Peptidase_M1_N
Motif
Other DBs
NCBI-GeneID:
113275639
NCBI-ProteinID:
XP_026380960
LinkDB
All DBs
Position
4:complement(59783317..59797386)
Genome browser
AA seq
1421 aa
AA seq
DB search
MAKPRKPKNEDQKSDSNKAVVLHQKLCLSIDIDKQIIHGYTELRISIPENGIIGLHADNM
IIENVIVDGDKTVEFEYSSHYQAIIDDERRWCSAVSSTNSAADAACSTYMSSLDKEMTPN
LLIKMVKENEIRAENGSQSETGSKQQNVKMFRIDYRIEKAECGVHFGSNVMHTNNQIRRA
HCWFPCMESSSQLCCYDLEFTVPENLVAVSNGTLIHQIISKDYPPRKTYVYKLSVPVSAG
WITLAVGPFEVFPDRHSGSISHMCLSSNVSELRNTIGFFHSAFSHYEDYLARSFPFGSYK
QIFIEPEATVSSLSLGASLSIFSSQVLFDEKVLDQTLETRVKLAYALARQWFGVYITAET
PNDEWLLDGLACYLTDTFIKRFLGNNEARYRRHKANCAVCRADVDGATALSSSAASTELY
GTHCIGLYGKIRTWKSVAVLQMLEKQMGPDTFCKILQMIVVKPQDKTRSLRTLSTKEFRH
LANKVGNLERPFLKEFFPRWVGSCGCPVLRMGLSYNKRKNMVELAVLRGCTASPDAIASV
AKANPEAETRESGVGCPGMMSIRVHELDGMYDHPVLPMAGETWQLLEIQCHSRLAAKRIQ
KIKKGSKPDGSDDNADAVPTPDMRPNAESPLLWLRADPEMEYLAEIHFNQSVQMWINQLE
KDKDVVAQAQAIGTLMTLPQLSFAVINALNNFLGDSKAFWRVRIEAAFALAHTASEETDW
AGLLHLVKFYKSRRFDAEIGLPRPNDFHDFPEYFVLEAIPHAIAMVRTTDKKSPREAVEF
VLQLLKYNDNNGNPYSDVYWLSALVQSVGELEFGQQNILSLSSLLKRIDRLLQFDRLMPS
YNGILTVSCIRTLTQIALKLSVSIPFLQERVFELIKPFRSFDAMWQIRIEASRALLDLEF
SCKGIDAALSLFLSYLMEEVSLRGQVKLAVHAMRLCQLRLASESEDDIKGPTLLALLCML
ESRKAFNNVFLRHHLFCILQLAAGRRPTLHGVPKIHIPPMGDPETCNEQKNKPAPALDIA
PALDIAPAPVPAPAMKLRISRPQEPFSDVLVVPINNLPETPANVIDLSKEADSVSNGSER
RRPIVKIRVRQSAASSRAEEADHIVVDKSQGGKNDVLERGASSSMSVDAPPRNTENMSTS
NHNLEEVNSCQDFGSRMTASIGSVRILNDEDEIRKELQCTAESGKAASTAPLQHQLEDCF
SPSIKGSEGEGETEVKKYMSLETMSIERYDHEGRQPSAMKEPIIEIEKDKEKKKKKKDKD
KKRRREDKEGHKGRDDPEYLEKKRLKKEKKQKEKLKEKEMTKLQSLQAPSSLKEGILKET
EMTKLLSRSAEASQKPRIKIETSPSEIPRVKIEGIPIVKSAKVQLKPIESSGSKVAIKTE
ETRVGDNGEGSSLPKTRVGDNGEGSSLPKIRIKIKRTLNNS
NT seq
4266 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcctcgtaaacctaaaaatgaagaccaaaaatcagacagtaacaaagcagta
gttctccatcaaaaactctgtctctcaatcgacatcgacaaacaaatcatacacgggtat
acggagttacgaattagtataccagagaatggaattatagggttacacgcagataatatg
attatagagaatgttatagttgatggagataaaactgttgagtttgaatattcatcacat
tatcaagctattattgatgatgaaagaagatggtgttctgctgtttcatcaacgaattca
gctgctgatgctgcttgttcaacttatatgtcttctcttgataaagaaatgactcctaat
ttgttgattaagatggtcaaagaaaacgaaattagggcagaaaatgggtctcaatctgaa
actggttctaaacagcagaatgtgaaaatgtttcggattgattatcggatagagaaagca
gaatgtggagttcattttgggagtaatgtgatgcacactaacaatcaaattaggagagct
cattgctggtttccttgtatggagagtagctcgcaactttgctgttatgatctggaattc
actgttcctgaaaatcttgtggcggttagcaatgggaccttaattcatcagatcataagc
aaggattaccctcctcgcaaaacctacgtctataaattaagtgttcctgttagtgctggg
tggattactttggcagttggaccatttgaagtttttcctgaccgtcatagtggtagtata
tcacacatgtgtttgtcgtctaacgtctcagagcttcgaaatacaattggtttcttccat
agtgcattcagtcactatgaagattatcttgctagatcctttccatttggatcatacaag
caaatttttattgaaccagaagctacagtatcttcacttagcttgggagcttccttgagt
atctttagttcacaagttctatttgatgagaaggttctagatcagacactagagaccagg
gtaaagctggcgtatgccctagcaagacagtggtttggggtgtacatcactgctgagaca
ccaaatgacgaatggttgctcgatggtcttgcttgttatctcactgatacttttatcaag
cgattccttgggaataatgaagctcgttatcgtcgacacaaggcaaactgtgctgtgtgt
agagcagatgttgatggtgctactgctttgagttcttctgctgcttctacggaattgtat
ggtactcattgcatcggtttgtatggaaaaatccgaacatggaagtctgtggcagttctt
cagatgttggaaaagcagatgggtcccgatactttctgcaagattttacagatgatcgtt
gtcaagcctcaggataaaactcgctccttgagaactcttagcacaaaggagtttcgtcat
ttggctaacaaggtgggcaaccttgaacgaccatttttgaaagaattttttccacgctgg
gtgggatcctgtggctgtccagtactaaggatgggattgtcttacaacaaacgcaaaaat
atggtcgagttggccgtgttgaggggttgcacagcatcaccagatgcaattgcctcagtt
gctaaagccaaccctgaggctgaaacccgagaaagtggtgtgggatgccctgggatgatg
agcattagagttcatgaacttgatgggatgtatgaccatccagttttacccatggctgga
gagacttggcaattgctggaaattcaatgtcactcaaggcttgctgcaaaacgcattcaa
aagattaaaaaaggttccaaaccagatggctctgatgataatgctgatgctgttcctact
ccagatatgcgtcctaatgccgagtccccactactatggctcagggcagatccagaaatg
gaatatcttgctgaaatccattttaaccaatctgttcagatgtggattaatcaactagag
aaggacaaagatgttgttgctcaagcacaagctattggaaccttgatgacattaccacag
ctttcctttgcagttattaatgctctcaataatttccttggtgattcaaaggctttttgg
agagttcgcattgaggcagcctttgcattggctcatacagcttctgaggagacagattgg
gctggtttacttcatcttgttaaattttataagagcagaagatttgatgccgaaattgga
ctgccaaggccaaatgacttccatgattttcccgagtacttcgttcttgaggccattcca
catgcaatagccatggttagaacaacagacaagaaaagcccaagagaagcagtggagttt
gtccttcaacttttgaagtacaacgataacaatggcaatccttactcagatgtctactgg
ctttctgcattggtccagtcagttggggaactagagtttgggcaacagaatatactctct
ttatcatctcttctcaaacgcatcgatcggcttctacaattcgacaggttgatgccaagc
tacaacggaattttgactgtcagttgtattcgcacgctcacacagatagccttgaagctc
tcagtgtctattcctttcctgcaggaacgtgtgtttgaacttatcaaaccatttcgtagt
tttgacgctatgtggcaaattcgaattgaagccagcagagctcttcttgatcttgaattc
agctgtaaaggcattgatgctgcattgtcattgttcctaagttatttgatggaagaggtg
tctttgcgaggccaggtgaagttggctgtccatgcaatgcgtctgtgtcagttacgtctc
gcatctgagtctgaagatgatattaagggtcctactctcctggctttgctttgtatgctt
gaaagtcgtaaagcctttaataatgtcttccttcggcatcacttattttgcatcttacaa
ctcgctgcagggaggcgaccaacacttcacggcgttccaaaaattcacatacctcccatg
ggagatccagagacatgtaacgaacagaagaataaacctgctcccgctcttgatattgcc
cctgctcttgatattgctccagctccagttcctgctcctgctatgaagctaaggatatct
aggcctcaggaaccattttcagatgtacttgtagtaccaatcaacaacttgcctgaaact
ccagcaaatgttatagatctttcaaaggaagcagatagtgtttccaatggtagtgagaga
agaagacccatcgttaagattcgagtcagacaatctgctgcatcaagtagagcagaagaa
gctgatcatatagtggttgacaagtctcaaggtggaaaaaacgatgtgctagagagaggg
gcaagtagttccatgtctgtcgatgcacctccaaggaatacagaaaacatgagcaccagc
aatcataatctcgaagaagtgaattcgtgtcaagattttggttcccgaatgactgctagc
attggcagtgttagaattcttaatgatgaagatgaaatcaggaaggagttgcaatgcact
gctgagtcaggaaaagctgcttctaccgctcctctgcagcatcagcttgaagactgtttc
tcgcctagcatcaagggcagtgagggagagggagagacggaggtgaagaaatacatgagt
cttgaaaccatgtccattgagagatatgatcacgagggacgacagccatcagctatgaaa
gaacctattatagagatagagaaggacaaggaaaagaaaaagaagaaaaaagataaagac
aagaaacgccgacgggaagacaaagaaggccataaaggacgtgatgatcccgaatacctg
gagaagaagcgcctaaagaaagaaaagaaacaaaaggagaagctaaaggagaaggagatg
acaaagctgcaatctcttcaggccccgagttcattaaaggagggaatattgaaggagaca
gagatgacaaagttgctgagtaggtcggctgaggcatcacaaaaaccgcgtattaaaata
gagacatctccatcagaaataccgcgtgttaaaatagagggaattccaatagtaaaatca
gcgaaggtccagctaaaaccaattgaatcaagtggatctaaggtagcgataaagactgaa
gaaaccagggttggcgataatggtgagggtagttcacttcccaaaaccagggttggcgat
aatggtgagggtagttcacttcccaaaatacgtataaaaatcaaacgaactttgaacaat
tcttag
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