Papaver somniferum (opium poppy): 113275642
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Entry
113275642 CDS
T05758
Name
(RefSeq) transcription initiation factor IIE subunit alpha-like
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
113275642
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psom03021
]
113275642
Transcription machinery [BR:
psom03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
113275642
Prokaryotic type
Archaeal type
TFE
113275642
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
Zn_ribbon_SprT
Motif
Other DBs
NCBI-GeneID:
113275642
NCBI-ProteinID:
XP_026380964
LinkDB
All DBs
Position
4:59975857..59980991
Genome browser
AA seq
465 aa
AA seq
DB search
MSVEPFNRLVKLAARAFYDDIPLKGENQPKNGRSDNRGMAVVILDALTRRQWVREEDLAK
DLKLHTKQLRRTLRFFEEEKLVTRDHRKETAKGAQRFSAAVANTTDGHGKEGEEKIKLHT
HSYCCLDYSQIYDVVRYRHHRMKKKLKDELDCRNTVQEYVCPGCKRRYNALDALQLVSLT
GEGFHCENCNGELVAESDKLAADEMGDGDDNARRRRREKLRDMLQKMEGQLKPLLEQLNR
VKDLPCPEFGTLQAWEARASAAHRAAHGDANGNDPSKSSQQYGGTPLPFMGDAKVEVDFG
ATAKEEDVKPDAGAMKVLPPWMIMQGMNLTKEQRGEATTEELKVDGKPTSVDLSDDKKPK
VEKEDEKDTIQSEYYKAYYAALMKRQQEQDEAAKMNQEELTSSENGFSDMPSDRQVGMKA
KREDDDDVEWEDAPTTGKATGTCKLNDLNAPVEESEEDEIDWEDG
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgagtgttgaaccgttcaacaggttggtgaaattagcagcccgtgctttttatgatgac
attccattgaaaggcgagaaccagcctaagaatggtagaagtgataaccgtggaatggcg
gttgtgattctagatgcccttacaaggcgacaatgggtcagggaagaggacttggccaag
gatttgaagctacacacaaagcaactacgccggactctacgttttttcgaggaagaaaag
ctggtcacaagggaccatcgaaaagagacggcgaaaggtgcacagagatttagtgctgca
gtagccaacacaactgatggtcatgggaaagagggagaggaaaagataaaactgcatacc
cattcttactgctgcttggattattcacagatttacgatgttgtaagatatcgacatcac
cgcatgaagaaaaaactgaaggatgaacttgactgtaggaatacagttcaggaatatgtg
tgccctggctgcaagagaaggtataatgcgctggatgcacttcaactagtttccctaacg
ggtgagggttttcactgcgaaaactgcaatggtgaacttgttgctgagagtgacaaatta
gctgccgatgaaatgggtgatggagatgataatgcaaggaggaggagacgggaaaagttg
agggacatgcttcaaaagatggagggacagctgaaaccattgctggagcagctcaacaga
gtgaaggatttaccttgtcctgaatttggtactctccaagcttgggaagcccgagccagt
gctgctcaccgtgcagcacatggtgatgctaatgggaatgatccatctaagtcttctcaa
caatatggtggaacacctttgccatttatgggcgacgcaaaggttgaagttgattttggt
gcgacagcgaaagaagaggatgtcaaacctgatgctggagcgatgaaagtcttgcctcct
tggatgatcatgcagggcatgaatctcaccaaggagcaacgcggagaagccactactgag
gagttaaaggtcgatgggaagccaacatctgtagatttgtctgatgataaaaagccaaaa
gtcgaaaaggaggatgaaaaagatacaatacagagcgagtactataaagcttattatgca
gcgttaatgaaaaggcaacaagaacaagatgaagccgcgaagatgaatcaagaagagcta
actagttctgaaaatggtttctcagatatgccttctgatcgccaggtgggcatgaaagct
aaacgtgaggacgatgatgatgttgaatgggaagatgccccaacaacaggaaaggcaact
ggaacttgtaagttaaacgatttgaatgctcctgtagaagaatcggaggaggatgagata
gactgggaagacggttaa
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