Papaver somniferum (opium poppy): 113275722
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Entry
113275722 CDS
T05758
Name
(RefSeq) WD repeat and HMG-box DNA-binding protein 1-like isoform X1
KO
K11274
chromosome transmission fidelity protein 4
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psom03036
]
113275722
Chromosome and associated proteins [BR:
psom03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
113275722
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mcl1_mid
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
WD40
Beta-prop_EML_2
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
WDR55
ANAPC4_WD40
Ctf4_C
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
EIF3I
Beta-prop_EML
WD40_MABP1-WDR62_2nd
eIF2A
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_Vps41
Beta-prop_ELP1_1st
PEP5_VPS11_N
WD40_RFWD3
Beta-prop_SPT8
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
113275722
NCBI-ProteinID:
XP_026381057
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All DBs
Position
4:complement(64125042..64130477)
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AA seq
971 aa
AA seq
DB search
MKARSVKLKEAHKSSGSESTCSIIWDLESQHLVTSSTSDTKISIHDALLPAKPPKLVSHH
KEGVTALALNPNSTCLASGSLDHSVSLYNFPGGKFQTNVTRFTLPIRCLSFNKSGSLLAA
AGDDEGIKLIDTIDSTISRVLKEHKGPITGLAFDPIGEYLASVDSIGTVIFWQLSTGTPI
NILKRVAPNYETDTSVPNVLCWSPSGDFLAVPGLKNDVVMYDRDTSEEVGSLKGDHSQSV
CFMSWSPNGKYMATSSLDKQILVWDVRKKQDINRQKFEDTICSMAWKPTGNALAVIDTMG
KYGVWDSVVPSHMNSPLEGAPKPKSNGLDLFDEDTQEPSGSGSLSNVGESSFGEPEPLHK
KRLRKQTEFDMLDEDDDGAVGIPTKAEPRKKASHIHKKPKDDVYEEVGSGMKLGRPKMQD
AFQPGCTPLQSGKKRFLCYNMLGVITTMDTDGYPHIEVDFHDTGKGLRVPSMTDYFGFTM
ASLNENGSVFANPCKGEKNMSTLIYRPFSSWANNSEWSMRFEGEEVKVVALGTGWVAAVT
SLNYLRVFTEGGLQKHVISLDGPVVTASGFKDELAVVTHSSCLPSDDQILEFRVFNFAKE
AQAMKGRLPLTPGSCLTWLGYSEEGHLSSYDSKGVLRVFTSQFGGSWLPLFSASKDNPED
NYWVVGLNDSKLFCILCKNPLTYPLVTPKPFLTLLNLSFPLASSDLGANDLENEFMLSNL
SLSQVQRKIEEMATSHQNIMPLEDKAFDIETSLDRCILKLIAACCNGEKLERATELVKLL
SLDKSVQGAIRIATVLKLPVLADRFNCILEERMQNETTETTPFTKPSSDGFKAPNIMPVA
DNRRMEFENAVPPLKLPSPQFFKQEKAETSRSTVGKERLESNGSPSVEKIKINDLKVQGE
TNPPKKLMTIPEKPRLFGSVNKTTGKGNKSEEISPSESHRPTNPFAKSQNTQVKTSSLLD
SIKKMKDGGKS
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctcgatctgtaaagcttaaagaagcacataagagtagtggatctgaatccacc
tgttctattatctgggatcttgaatctcaacatctcgttacttcttccacttctgatact
aaaatctctattcatgatgcacttttacctgcaaaacctccaaaacttgtctctcatcat
aaggaaggtgttactgcattagctcttaatcctaattctacatgtcttgcttctggttca
ctcgatcattctgtctcactctataattttccaggtggaaaatttcaaaccaatgtaacc
aggttcacgttgccgatacgttgtctttcttttaataagtcaggtagtttgttggctgct
gccggtgatgatgagggtattaaattgatagacacaattgatagcacaatttcaagggtt
ctgaaagaacacaaaggacctataactggattagcttttgatccaattggtgagtatttg
gcatctgtagattcgattggtactgtgatattttggcaactgtccactgggacaccaata
aatattcttaaaagggttgctcctaactatgaaacagacacttctgtcccgaatgtcttg
tgctggagtccatctggggatttcttagctgtcccgggtttgaaaaacgatgttgttatg
tatgatagagatacatcagaggaagttggttcactcaaaggtgaccattcacaatctgtt
tgtttcatgtcttggtcacctaatggaaaatatatggctacatctagcttagataagcag
attttggtgtgggatgttcgcaagaagcaggatataaatcgccaaaaatttgaagacaca
atctgttctatggcttggaagccaactgggaatgcgttagctgtaatcgataccatgggg
aaatatggggtgtgggattctgttgttccttcacatatgaattctcctctagaaggtgct
ccaaaaccaaaaagcaatgggttggatttatttgatgaagatactcaagaacctagtggt
tctggtagtttgagtaatgttggtgaaagtagctttggcgagcctgagccacttcacaaa
aaaagactgaggaaacagaccgaatttgatatgttagatgaagacgatgatggtgcagta
ggcattcctaccaaggccgaacctcgcaaaaaagcttctcatattcacaagaaacctaaa
gatgacgtgtatgaggaagttggtagtggaatgaagcttggaagaccaaaaatgcaggat
gcctttcagccaggctgtacacccttgcagagtggaaaaaaacgtttcctttgctacaac
atgcttggagtcattactacgatggatactgatggatacccccacatagaggttgacttc
cacgacactggtaaaggccttcgagtaccctcaatgaccgattattttggttttacgatg
gcttcacttaatgagaatggaagtgtatttgcaaatccatgcaagggcgagaagaatatg
agtactcttatctatcgcccattcagtagctgggctaacaacagcgagtggtcaatgcgc
tttgagggagaagaagttaaggttgtggctcttggtactggttgggttgctgctgttacc
agtttaaattatctacgcgtattcactgaaggtggactgcagaagcatgttatctctcta
gatggaccagtggtgacagcatctggcttcaaggatgagctggctgttgtgactcattct
tcttgtcttccttctgatgatcagattttggagttcagagtattcaactttgcgaaagaa
gcccaagccatgaaaggtcgtcttccattaacacctggttcatgtttaacatggctaggt
tatagtgaagaaggccacctaagttcttatgattctaagggtgtattgagagtgttcact
agccaattcggaggaagttggttacctctcttcagtgctagcaaggataatcccgaggat
aattactgggtggttgggttgaatgatagcaaattgttctgtattctctgcaaaaatcct
ctgacatatcctctggtgacacccaagccatttcttacactactgaatctttcatttcct
ctagcgtcttctgatctgggagctaacgatcttgaaaatgaatttatgttgagcaaccta
tctctctcacaggttcagagaaagattgaagaaatggccacttctcatcaaaatatcatg
ccattagaagacaaagctttcgatattgagacatctctcgacagatgcatcttgaagctt
attgcggcatgctgcaatggtgagaagcttgagagagctactgagcttgtgaaactttta
tctttggataaatcagtgcaaggtgcgataaggattgctactgtcctgaagcttcctgtg
ttggctgatcgctttaattgcatccttgaggaaagaatgcaaaatgaaactactgagaca
actccattcacaaaaccatcctctgatggttttaaagcccccaatatcatgcccgttgct
gataacagaaggatggaatttgaaaatgcggtgccaccactaaagcttccttcacctcaa
tttttcaagcaagaaaaagcagaaacaagtaggtctactgtgggaaaggagagattggaa
tccaacggaagtcctagtgtagagaaaataaagataaatgatcttaaggttcagggtgaa
actaatcccccgaaaaagttgatgaccattccagagaagcctagattgtttggttctgtt
aataaaaccacaggcaagggaaacaaaagtgaagagataagtccatctgagtctcatcga
cctacaaatccatttgcaaagtcacagaatacccaggtaaagacatcatctctgttggat
tctatcaagaagatgaaagatggaggtaaaagctag
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