Papaver somniferum (opium poppy): 113275919
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Entry
113275919 CDS
T05758
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1-like isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psom03041
]
113275919
Spliceosome [BR:
psom03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
113275919
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
RRM_occluded
DUF4523
HPTransfase
DcuA_DcuB
Motif
Other DBs
NCBI-GeneID:
113275919
NCBI-ProteinID:
XP_026381284
LinkDB
All DBs
Position
4:complement(74518006..74521720)
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AA seq
439 aa
AA seq
DB search
MSGQTQFRYTQTPSKVLHLRNLPWECIDEELVELCKPFGKIVNTKCNVGANRNQAFVEFV
DLNQAISMVSYYASSSDPAQVRGKTVYIQYSNRQEIVNNKSSGDIAGNVLLVTIEGVEAG
DVSIDVIHLVFSAFGYVQKIATFEKAAGFQALIQFTDAVTASSARDALDGRSIPKYLLPE
HVDSCNLRISYSAHTDLNIKFQSHRSRDYTNPYLPVNPSAIEGTMQPVVGPDGKRKEPES
NVLLASIENLQYAVTVDVLHTVFSAFGTVQKIAIFDKNGGMQALVQYPDVTTAAAAKEAL
EGHCIYDGGYCKLHLSYSRHTDLNVKAHNDRSRDFTLPESAFLPMQQVSAAPTSSTSWQN
PQSAYPGTQHHDGHTYSSPPTTFPGHPAYSTAGSSSYLPPGHQGSSGMASQGMPSYSHQP
NVRPPGSASYAGQPPYYGR
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggacaaactcagtttaggtatacgcaaacaccatcaaaagtacttcaccttcgt
aatttaccatgggaatgtatagatgaagaattggtcgaactatgcaaaccttttggcaag
atcgtcaatactaaatgcaacgttggtgctaatcgtaatcaagcctttgttgaatttgtg
gacttaaatcaagcaatctcaatggtatcatattatgcgtcatcgtcagacccggcacaa
gttcgtggtaaaactgtttatattcagtattcaaataggcaggaaattgtgaacaataag
agttctggagatattgctggaaatgtgttgcttgtgacaattgaaggtgtcgaagctggt
gatgtcagcatagatgttattcacttggtcttttctgcttttgggtatgtgcaaaaaatt
gccacattcgagaaggctgcaggttttcaggcgttaattcaattcactgatgctgtcact
gcatcttcagccagagatgcacttgatggaagaagtatacccaagtacttgcttccggaa
catgttgattcatgcaacttgcgcatctcgtattctgcacatactgatttaaatattaag
ttccaatctcatcggagcagggactacacaaatccctaccttcctgtgaatccttctgca
attgagggcaccatgcagcccgtggtaggtcctgatggaaagagaaaagaacctgaaagt
aacgtacttctcgcttcaattgagaatctgcaatatgctgtcactgttgatgttcttcac
acggtattctcagcgttcggaacggttcaaaaaattgctatatttgataaaaatggtgga
atgcaagcactagtccagtacccagatgtcacaactgctgctgctgctaaagaagctttg
gaagggcattgcatctatgatggtggctactgtaagcttcatctgtcatactctcgtcat
actgatctcaatgtaaaggcgcataatgaccgaagtcgagacttcacacttccggagtca
gcttttctcccgatgcagcaagtgtctgcggctccgacttcctcgaccagttggcaaaat
cctcagtctgcttaccccggcacacaacaccatgatggacacacttacagctcacctcca
acgacatttcctggtcatccggcctactccactgcgggatcttcatcatatttgcctcca
ggtcatcaaggctcttctggtatggcttcacagggaatgccttcatacagtcaccagcca
aatgtcagacctcctggtagtgcttcatacgctggtcaaccaccttattatggtcggtaa
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