Papaver somniferum (opium poppy): 113276475
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Entry
113276475 CDS
T05758
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a-like
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03010
Ribosome
psom04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
113276475
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113276475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
psom03011
]
113276475
04121 Ubiquitin system [BR:
psom04121
]
113276475
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psom04147
]
113276475
Ribosome [BR:
psom03011
]
Ribosomal proteins
Eukaryotes
Small subunit
113276475
Archaea
113276475
Ubiquitin system [BR:
psom04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
113276475
Exosome [BR:
psom04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
113276475
Exosomal proteins of colorectal cancer cells
113276475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_S27
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
Dsc3_N
Plexin_RBD
TBK1_ULD
Ubiquitin_5
UBL_UBAC1
DUF2604
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
113276475
NCBI-ProteinID:
XP_026381860
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All DBs
Position
4:complement(121078333..121078991)
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AA seq
156 aa
AA seq
DB search
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHRKVKLAVLQFYKVDDLGKVQRLRKE
CPNSECGAGTFMANHFDRHYCGKCGLTYVYQKAGDV
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcttcgttaaaaccctaacagggaagacaataacccttgaggttgagagcagt
gatacaatcgacaatgtcaaagctaagatccaagacaaagagggaatccctccagatcaa
cagcgtttgattttcgcaggaaagcaactggaagatggtcgtactctagctgattacaat
atccagaaagaatcaacacttcatttggttttacgtctgagaggtggtgctaagaaaagg
aagaagaagacctacactaaaccaaagaagatcaagcacaagcataggaaagtgaagttg
gccgtgttgcagttttacaaagttgatgatcttggaaaagttcagaggttgagaaaggag
tgccctaattctgagtgtggtgctgggactttcatggctaatcattttgatcgtcattat
tgtggtaagtgtggtttgacatatgtttaccagaaggctggagatgtctga
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