KEGG   Papaver somniferum (opium poppy): 113278243
Entry
113278243         CDS       T05758                                 
Name
(RefSeq) U2 small nuclear ribonucleoprotein B''-like
  KO
K11094  U2 small nuclear ribonucleoprotein B''
Organism
psom  Papaver somniferum (opium poppy)
Pathway
psom03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:psom00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113278243
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:psom03041]
    113278243
Spliceosome [BR:psom03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    113278243
 Complex B
    113278243
 Complex C
   U2 SnRNP specific factors
    113278243
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_PARP14_3 xRRM DUF4523 RRM_occluded
Other DBs
NCBI-GeneID: 113278243
NCBI-ProteinID: XP_026382921
LinkDB
Position
5:179216676..179219659
AA seq 230 aa
MLSGDIPPNQTIYVKNLNEKVKKEELKRSLYAVFSQYGRILDVVALKTEKLRGQAWIVFS
EVTASSNAVRHMQNFSFYDKPMRVQYAKTKSDCVKTEEEKKKKNEEKSDKKRKAEDTPEA
GARANGASATAQNNGGSTAPFRPGKSGEQDSNAAPNNILFIQNLPHETTDQMLQLLFEQY
PGFKEIRMTNAKPGIAFVEFGDDVQSSIAMQALQGFKVSPHNPMAISYAK
NT seq 693 nt   +upstreamnt  +downstreamnt
atgctttcaggagatatacctccaaatcaaacaatatatgtcaaaaacctcaacgaaaag
gttaagaaagaagagttgaagagatctctttatgctgtattctctcagtatgggaggatt
ttagatgttgttgcgttaaagacggaaaagcttcgtggtcaagcatggattgtgtttagt
gaagttacagcttctagtaatgcagtgcgccacatgcaaaacttctcgttttacgataaa
cctatgagggtacaatatgcaaaaacaaagtcagactgtgttaaaactgaagaagagaag
aaaaagaagaacgaagaaaaatctgataaaaaacgaaaggctgaagatacgccagaagct
ggtgcaagagctaatggtgcaagcgcaactgctcagaataatggtggatccactgctcct
ttccgcccaggaaaatctggcgagcaagattctaatgcagctcctaacaacatacttttc
atccagaatctcccccatgaaacaacagaccagatgctgcaattgctttttgaacagtac
cctggctttaaggaaattcgaatgaccaacgcaaagcctggtattgcatttgtagagttt
ggagacgacgtgcaatcgtcaattgccatgcaggcacttcagggcttcaaagtttcgcct
cataacccaatggccatcagttatgccaagtag

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