Papaver somniferum (opium poppy): 113278345
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Entry
113278345 CDS
T05758
Name
(RefSeq) transcription initiation factor IIB-2-like
KO
K03124
transcription initiation factor TFIIB
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
113278345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psom03021
]
113278345
Transcription machinery [BR:
psom03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
113278345
Prokaryotic type
Archaeal type
TFB
113278345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Ribosomal_S27e
zinc_ribbon_6
Motif
Other DBs
NCBI-GeneID:
113278345
NCBI-ProteinID:
XP_026382994
LinkDB
All DBs
Position
5:complement(188808847..188809967)
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AA seq
305 aa
AA seq
DB search
MEDIFCSDCKRNTAVVFDHSAGDTICSECGLVLEAHSIDETSEWRTFANETTENDPHRVG
EKSNHLLTDSGLTTMISMPTGGANRSSIGSFRNINTPDPDRGLIEAFKTIGVMAERLGLV
TTIKDLANEIYKKMDDAKATRGRNKEALMAACLFTACNQLGPRTMKEIHSVTSGGVTRKE
IGRAKLEISKHLEGVSDVTTRAVDIIRRFGSNLGMSIKAVKAAEEAVGNTEACDIRRTPI
TVAASIIYMIAQLSEKTKLIREVADVTGVAHGTIKNSYKDIYPHAAKLVPAWYANAEDLK
KLPSP
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggaggatatattttgttccgattgtaaaagaaatacagcggtagtatttgaccattcc
gccggagatacaatctgttccgagtgtggccttgtattagaagcccactcgattgatgaa
acatctgaatggagaacttttgctaatgaaacaactgagaacgatcctcaccgtgttgga
gagaaatcaaatcatcttcttacagatagcggcttaaccacaatgatttccatgccgact
ggtggtgcgaatcgctcttctattgggagttttcgtaatattaatacgcctgatcctgat
aggggccttattgaggcgtttaagacgattggggtgatggctgagaggttagggcttgtt
acgactataaaagatttggctaatgagatttataagaagatggatgatgccaaggctact
agagggaggaataaggaagcattgatggctgcttgcttgtttactgcttgtaaccaacta
ggaccgagaacgatgaaggagatccattccgttaccagtggtggtgtgactaggaaggaa
attggacgtgccaaattggagattagtaaacatctggaaggagtctcggatgtgactaca
agagctgttgatattattaggcgttttggttccaatcttggtatgagtattaaagctgtg
aaagctgctgaagaagcagttggaaacactgaagcttgtgatattaggaggactcctata
acggttgcggcgtcgattatttacatgatagctcaattgtctgagaagacaaaactgatt
cgagaggttgctgatgtaactggtgttgcacatggcactattaagaattcttataaggat
atttaccctcatgcggcaaaactggtaccagcttggtatgctaatgcagaggacctcaag
aagttgcctagcccttaa
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