Papaver somniferum (opium poppy): 113278513
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Entry
113278513 CDS
T05758
Name
(RefSeq) vacuolar protein sorting-associated protein 53 A-like
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psom04131
]
113278513
Membrane trafficking [BR:
psom04131
]
Protein recycling
Others
EARP complex
113278513
Endosome - Golgi transport
Tethering complex
GARP complex
113278513
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
COG4_N
COG7
Vps54_N
MUN
HemX
XhlA
MPH2
COG5_N
Motif
Other DBs
NCBI-GeneID:
113278513
NCBI-ProteinID:
XP_026383125
LinkDB
All DBs
Position
1:6280601..6291366
Genome browser
AA seq
824 aa
AA seq
DB search
MDKSGALEYINQMFPTEASLPGVEPLIQKIQSEIARVDAGILTAVRQQSNSGTKAKEDLA
AATSAVQELMHKIREIKTKAEQSETMVQEICRDIKKLDFAKKHITTTITALHRLTMLVSA
VEQLQVMASKRQYKEAAAQLEAVNQLCSHFEAYRDVPKINELREKFKNIKQILKSHVFSD
FSSLGTGKETEEANLLQQLSDACLVVDALEPSVREELVKNFCSRELTSYRQIFEGAELAK
LDKAERRYAWIKRRLRTNDEIWKIFPSSWHVAYLLCIQFCKLTRTQLEDILDNLKEKPDV
GTLLLALQRTIEFEDELAEKFSGGTWNREAGNDVEDVNKGESNNQAVIDIRKKYEKKLAS
HQGSGSEEKDGHKDLSVPGAGFNFRGIISSCFEPHLIGYVELEEKTLMETLEKLVQDETW
DTEEGSQTNILSSSMQVFLIIRRSLKRCSALTKNQTLFNLFKVFQRILRTYASKLFARLP
KGGVGIVAAATGTDGQIKTSDRDERVICYIVNTAEYCHKTSGELAENVAKIIDSQYADKV
DMSDVQGEFSTVITRALVTLVQGLETKFDAEMAAMTRVPWGTLESVGDQSEYVNSINLIL
NSSIPVLGSLLTPIYFQFFLDKLAASLGPRFYLNIYKCKHISETGAQQMLLDTQAVKTIL
LDIPSLGRTTSSASSYLKFVSREMSKAEALLKVILSPVDSVSDTYRALLPEGTPSEFQRI
LELKGLKKADQQSILDDFNKNRSGVTQPSVVVQSAVPAAPTSPAVVAAAGSAISTMGIAS
REDVLTRAAALGRGAATTGFKRFIALTEAAKDRKDGPFRKLFSP
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atggataagtcaggtgctctggagtacatcaaccagatgttccctacagaagcatcttta
cctggagtggagccacttattcaaaagattcagagtgagattgctcgtgttgatgcaggg
atactgactgcagttcgccaacagagtaattctggtactaaagccaaagaagatcttgct
gcagctacaagtgctgttcaggaactcatgcataagatccgggaaataaaaaccaaggcc
gagcaaagtgaaaccatggttcaagaaatttgtcgtgacatcaaaaagctggattttgca
aagaagcacataacaactacaatcactgctcttcatcgacttacaatgctcgtctcagct
gttgagcaacttcaagtaatggcttcaaagcgccaatataaggaagcagcggctcagttg
gaggcggtaaaccagttatgcagtcattttgaggcctatagagacgttccaaagattaat
gagcttagagagaagtttaaaaacatcaagcaaatactcaaatctcatgtattctcagat
ttctcaagcttaggtacagggaaagagacagaggaagccaatttattgcaacaattatct
gatgcttgcttagttgttgatgctttggagccttctgtgagagaagagttggtgaaaaac
ttctgcagtagggagcttacttcataccgtcagatctttgaaggagctgagttggccaag
ttggataaagctgaacggagatatgcatggatcaaaaggcgtttgcgaacgaatgacgaa
atttggaagatctttccttcttcttggcatgttgcgtatttgctttgtatccagttttgt
aaattgacaagaacacaacttgaggatatacttgataatctgaaagaaaagcctgatgtt
ggaactctgttattggcattacaaagaacgattgagtttgaggacgagttggctgaaaaa
ttcagcggaggcacttggaatagggaagctgggaatgatgttgaggatgtaaataaaggg
gagagtaataaccaagctgtaatagacattcgaaagaagtacgaaaagaaacttgcttcg
catcaaggaagtggctcagaggaaaaggatggccataaagacttgtcagttcctggagct
ggattcaacttccgagggattatctcatcttgttttgaacctcacctgattggatacgtt
gaactggaggagaaaacactaatggagaccctggaaaaacttgttcaggatgaaacctgg
gatacagaggagggaagtcagacaaatattttatcaagtagcatgcaggtgtttctgata
atcaggagaagcttgaagagatgcagtgcattgacgaagaaccaaacgctgtttaatctg
tttaaggtgtttcaaagaattcttagaacatatgcttctaaacttttcgcaagattacca
aaaggtggagtggggatagttgcagccgctactggtaccgatgggcagatcaagacttct
gacagggacgaaagggtgatatgttatatagtgaatactgcagaatattgccataaaacg
tctggtgaactagctgaaaacgtggcaaaaatcattgattcccagtatgcagataaagtg
gatatgtcggatgtgcagggtgaattctcaacagtaataactagagcgttggtgacacta
gtgcaaggtttagaaaccaaatttgatgctgaaatggctgcgatgacacgtgttccatgg
ggtacacttgaaagtgttggcgaccagtcagagtatgtcaatagcataaatttgattctt
aatagcagcattcctgtgctcggaagtttgttaactcccatttacttccagtttttctta
gacaagcttgcagcttctttgggtccacgcttctacctcaacatttacaagtgcaaacac
atatcggagaccggagcacagcagatgctgctggatactcaggctgtaaagacgatactt
ttggatatcccttctttgggaagaacaacatcaagtgcctctagctacttaaaattcgtc
agtcgtgagatgagcaaagctgaagcactgttgaaggttattctatctcctgttgattct
gtcagcgatacttacagagctctgcttccagagggaacaccttcggaatttcaacgaatt
ctggagcttaagggcctaaagaaagcagatcaacagagcatactggacgacttcaataag
aacagatccggggttacccaaccatctgtagttgttcagtcagctgtgccggcagcaccg
acatcccctgctgttgttgctgcagctggtagtgcaatctcaaccatgggtattgcttct
cgtgaggatgtgttaactcgagctgctgcacttggaagaggtgctgcaacaactgggttc
aaaagattcattgccctaacagaggcagccaaggataggaaagatgggcctttccgcaag
ctttttagtccgtga
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