Papaver somniferum (opium poppy): 113278689
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Entry
113278689 CDS
T05758
Name
(RefSeq) squalene synthase 1-like
KO
K14066
geranyl diphosphate synthase [EC:
2.5.1.1
]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom00900
Terpenoid backbone biosynthesis
psom01100
Metabolic pathways
psom01110
Biosynthesis of secondary metabolites
Module
psom_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
113278689
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
psom01006
]
113278689
Enzymes [BR:
psom01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
113278689
Prenyltransferases [BR:
psom01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
113278689
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
SQS_PSY
BAR_3
Motif
Other DBs
NCBI-GeneID:
113278689
NCBI-ProteinID:
XP_026383242
LinkDB
All DBs
Position
1:complement(7080801..7084709)
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AA seq
744 aa
AA seq
DB search
MDELKMAASFLREVEKLKIAEKNIPLEPHWAFCYSMFQKDCIRRLFGDVSSLKLLSGIDP
HAIALSIQRYLGPELRNAICVFYCVLRALDTVEDDMNMPSDVKVPILENFHRHIYDGHLQ
FSCGTNHHKELIDQFHHVSTAFSELRKSYQELIEETTRKMGAGMAKFILKEVETMNDYNE
YCHIVAGLVFIGMSELCHASDSADFPPEHLSNSMGLILQKINIIQDFSDDMNAKPKVHMH
WPRHIWSKYVDKLEELAYKENSEKAVSCLNDMVTDALSHVEDCLEYLSTLQDSAMFRFYA
VNLIISTGILARCYNNVEVFRGGVKMNHGHSVKVICGTKAISDVYGAFYDYSSTLKAKID
DNDPNATKTRSRVEAIQKVCENLEMGVKEKIYHVQQGGSSLVEQQVDPFSLVADELSLIG
NRLRETVQVVGVPKLASAAGYFFEVGVEGKRFRPTVLLLMASALNMSLPGSALDTAKADQ
LRASQQRVAEITEMIHVASLLHDDVLDDADTRRGVPSLNTLMGNKVSVLAGDFLLCRACV
TLSTIKHFEVSEALGTAAENLIAGEMMQTASTSEKHYNMDQYMQKTYYKTASLIANSCKA
VALLADHENEVVMLAYNYGRNLGLAYQLIDDVLDFTGTSASLGKGSLSDIRHGIITAPVL
FATEEFPELQAVINRGFDDPANVDRALEYLQKSRGIQRAKELAIEHANMAASAIDSFPKS
DDDNVRISRQALVELTRMVITRTK
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atggacgaacttaaaatggcagcaagttttttaagagaggtggagaagctcaagattgct
gagaagaacataccacttgaacctcactgggccttttgctattcaatgtttcagaaagat
tgtatcaggcgtttgttcggagatgtttcttctctcaaattattatctggaatcgaccct
cacgcgatcgccttgtctattcaacgatatcttggtcccgagcttcgaaatgccatatgc
gttttctattgtgttctcagggcgcttgacacagttgaggatgacatgaacatgccttca
gatgtaaaggtgcctattctcgaaaattttcatcgtcacatttatgatggtcatcttcag
ttctcatgtggtacaaatcaccacaaagagctaatagaccaatttcatcacgtttcaact
gcgttctcggagcttcgaaaaagttatcaagagttaattgaagaaacaacaagaaaaatg
ggtgctggaatggcgaaatttatactgaaggaggttgaaacaatgaatgattacaacgag
tactgtcacattgtagctggacttgttttcataggaatgtcggaactttgtcacgcctct
gattcagcagattttcctccagagcatctctccaattccatgggtttaattcttcagaaa
ataaatattattcaagacttttcagacgatatgaatgcaaaaccaaaagtacatatgcac
tggcctcgccatatttggagtaaatatgtggataaacttgaggaattggcatacaaagaa
aactcagaaaaagctgtttcttgcttaaatgatatggtcactgatgcattatcgcatgtg
gaggattgcctagagtacttgtctactctgcaggattctgctatgttccgattttatgct
gttaatctgatcatttccaccggaatacttgcccggtgttacaacaacgttgaggttttc
agaggaggagtgaaaatgaatcatggtcattctgttaaagtgatctgcggaacgaaagcc
atatctgatgtttatggtgctttctatgattattctagtacgctgaaggctaagattgat
gataatgatccgaacgccacaaagacacgtagtcgagtagaagcaatacaaaaagtttgt
gaaaacttagagatgggagtaaaggaaaagatctatcacgttcagcaaggtgggagttct
ttggtagagcagcaagttgacccattttctcttgttgctgatgaactctcacttattggt
aaccggttacgggagacggtgcaggttgttggggtacctaagctcgcctcagctgcagga
tacttctttgaggttggagtagaaggaaagaggtttcgtcccacggttctgttgttgatg
gcgtcagctttaaatatgtcactacctgggtccgctctggatactgccaaggccgatcaa
ctccgcgcaagccagcagcgtgttgccgagattaccgagatgatccatgtggcaagtctt
cttcatgatgatgtgttagatgatgccgatacaaggcggggcgtcccttccttgaacact
ttaatggggaataaggtgtctgtgctagcaggagattttctgctttgtcgagcttgtgtg
acactttccactataaaacattttgaggtttccgaggcacttggaacagccgcagaaaac
ctaatagctggtgaaatgatgcaaacggctagtacatcagagaaacattataacatggat
caatatatgcaaaagacatactacaagacagcatcattgattgccaacagctgcaaggca
gtggctcttctggcagaccatgaaaatgaagttgtaatgttggcttataactatggccga
aatcttggtttggcatatcagttaattgatgatgttcttgatttcacagggacgtcggct
tccctcggaaagggctctttatcagacatccgccatgggattataacggctccagttttg
tttgcaaccgaagaattccccgaattacaagcagttataaatcgaggtttcgatgaccct
gcgaatgttgatcgtgcccttgaataccttcagaagagtcgtggaatccagagagctaaa
gagctagcaattgagcatgctaacatggcagcctcggccatcgactcttttcctaaaagt
gatgacgataatgtcagaatatcgagacaggccctagtggaacttacccgtatggtcatc
acaagaacaaagtag
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