Papaver somniferum (opium poppy): 113278857
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Entry
113278857 CDS
T05758
Name
(RefSeq) nuclear pore complex protein NUP62-like
KO
K14306
nuclear pore complex protein Nup62
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113278857
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psom03019
]
113278857
Messenger RNA biogenesis [BR:
psom03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
113278857
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nsp1_C
DUF6306
53-BP1_Tudor
Motif
Other DBs
NCBI-GeneID:
113278857
NCBI-ProteinID:
XP_026383378
LinkDB
All DBs
Position
1:8497384..8504804
Genome browser
AA seq
768 aa
AA seq
DB search
MFGTNFSMTSSQTQSSPFSSPSPFSFGTAAASSSPFSTTPSTGLSFGTTTFGSSTPSTNL
FSGGGGGFQQPSTTSNNLFGSSTATTTPSFGNTTTSPAPAFGFPTTTTAPASGGSSLFGS
TAPAFGTTAPAGGGSSLFGSTTPAFGTAAPAGGGSSVFGSTASAGGGSSFFGSTSASPAV
SNAAPAFSMSSFGAPSTAAAVTNAAPAFSMPSFGAPTAAAASTTVAASPGFSTSNLFGTP
SSVPSTTASASTTTTTTTAAAPFSSMFPSTAASSSSPFSASAFSFGTGSALANTTASFTQ
TTAPAQAVPAATAATSSTTPSAFSFGTPTSSPFGFNTASAATTTAASTGSLSSPAPTKPS
FSGFGAATGFASTTTTTTGPVLSASTASATLATTASSVSTGLLSSPAPAKSMFSGFEGAT
GLTSTVTTTTPTSPATGLFASQAATAAASTPSISTPAVATSLATSTPASEAKTTTTSAAT
TSPFPSFSLSTKTSAPTSSSPTPALFGNPASASASAPADSAAKTSFTASTASATQPSNSL
AVATSSGTSSSTLTSTVSTGPKLPSQITGKTVEEIIKELNSELQERTGKFRKQALAIADW
DKRVLQNRDVLLRLETEVAKVVESQVNLERQLELVETHQQEVDKALLSVEEEAERIYKDE
RALILEDDAASTRDAMYEQAEYVEREMEQMTEHIKSIIQTLNASQGGDLDAADGMNPLDV
VVRILNNQLSSLMWIDEKAGEFSSRIQKLADQESPVNQSPVGSRYWMG
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgttcggaacaaacttctcaatgacttcatcacaaactcaatcttccccattttcatca
ccttctccgttttcattcggaactgccgctgcctcctcctcaccattttcaactacgcct
tccactggattatcctttggaactacaacatttggttcgtctactccttcaacaaatcta
ttctcaggaggaggaggaggatttcaacagccttccacaacttcaaacaatttatttggt
tcttctactgctactacaacccctagctttgggaataccaccacttctcctgcacctgca
tttgggtttccaacaacaacaacagcacctgcaagcggtggttcttcgttgtttggttcc
acagcacctgcatttggtacaacagcacctgcaggtggtggttcttcattgtttggttcc
acaacacctgcatttggtacagcagcacctgcaggtggtggttcttcagtgttcggttca
acagcatcagcaggtggtggttcttcattttttggttcgacatctgcatcaccagctgtg
tcaaatgcagcaccagctttctctatgtcttcgtttggagctccatcaacagcggccgct
gtgactaatgctgcaccagctttctccatgccctcgttcggagctcccactgctgctgct
gcttcaactactgttgctgcttctccaggtttctcgacttcaaatttgtttggaacacct
tcatctgttccttcgacgacagcttcagcttctactactactactactactactgctgct
gctcctttttcgagcatgtttccttcaactgcagcttcttcttcttcaccctttagcgca
tcagcattttcatttggaactggttcagctttggcaaataccactgctagctttacgcag
acgactgctcctgcgcaggcggtacctgctgcaaccgcagccacttcgtcaacaaccccg
tcagctttttccttcggaactccaacttcttccccatttggatttaacacagcatctgct
gcaactactactgcagcatcgactggctcactctctagccctgcacccactaagccttca
ttttcaggttttggagcagctactgggtttgcatcaacaaccaccaccaccacgggtcca
gtcttgtcagcaagtacagcatctgcaacccttgctactactgcaagttcagtatcgact
ggcctcctctctagccctgcacctgcaaagtcaatgttctcgggctttgaaggggctact
ggtctcacatcaacagtcaccaccacaacacctacttcccctgctactggtctctttgct
tcgcaagctgctaccgctgctgcttctacaccatctatttcgactcctgcagtcgctact
tctttggcaacaagcactccagcttcagaagctaaaacaaccactacatctgctgccaca
actagtccttttccaagtttctctttgtcaactaaaacatcagctccaacatcatcatca
ccaactcctgcattgttcggtaatcctgcttcggcttctgcaagtgcaccagctgacagt
gcagcaaaaactagtttcacagcttccacagctagtgcaactcagccatcaaattcgcta
gctgtagccaccagtagcggaacatcatcatcaactctcacttcaactgtatccactgga
cctaaactaccatctcagatcacaggaaaaactgttgaagagataattaaagagttgaat
tctgagctccaggagcggactggaaaatttagaaagcaggctctagctattgctgattgg
gataagagagttctgcagaaccgcgacgttttacttaggctcgagactgaagtggcgaaa
gtagtcgaatcgcaggtgaacttggagagacagctggagctagttgaaactcatcaacaa
gaggttgacaaggctttgctaagtgtagaagaagaagctgagcgtatatacaaggatgag
cgtgcgttaattcttgaggatgatgctgcatcaacaagagatgccatgtacgagcaggct
gaatatgttgagagggaaatggagcaaatgacagaacatataaaatcaattattcagacc
ttaaatgctagtcagggaggggacctcgatgcagccgatgggatgaatccgttagatgtt
gtcgttcgcattctaaacaatcagctcagttcacttatgtggattgatgaaaaggctggg
gagttctcttctcgcattcaaaaactagcagaccaggaatctcctgtaaaccagagccct
gttgggtcaaggtattggatgggttga
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