Papaver somniferum (opium poppy): 113278907
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Entry
113278907 CDS
T05758
Name
(RefSeq) ribosome maturation protein SBDS-like
KO
K14574
ribosome maturation protein SDO1
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
113278907
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psom03009
]
113278907
Ribosome biogenesis [BR:
psom03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
113278907
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBDS_domain_II
SBDS_N
SBDS_C
Extensin-like_C
Motif
Other DBs
NCBI-GeneID:
113278907
NCBI-ProteinID:
XP_026383414
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All DBs
Position
5:<29744384..29746835
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AA seq
322 aa
AA seq
DB search
LPSDIVYSNASKRTPAKSKDLIAAFQTDDLSEICIEILQNGEIQSESQLSRKFREIAAII
MQETFNPETKRPYTLSMIEKLMHGIHFAVAPHNNSKNQALGVICELQKHYPIKRTRSPMR
LRLIIPEKYSCSLMEKLDAWNAEIVSKVEYGNQQSLVCEVEPIFSQDCDALVRSLYGRLE
ILAVSVHFEKDADVVDDCEDWDDIEPVSIAELDDDDQWDVIEPGHHSPVPLNTAELDDHW
DVIEPSHHPPVQPSTAELDEIKLSEVLQKQSISTGNGADKKQLISTRNDGADKRSAEVEV
VEVKQRKCSICNALVGDAKQFR
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
ttgccgtcagatattgtttactctaatgcttcaaaaagaactccggcaaagtcaaaagat
ttgattgcggcattccagacagacgacttatcagagatttgcattgagattttgcagaat
ggagagattcaaagtgaatctcagttatcaaggaagtttcgggaaattgcagccataatc
atgcaagaaacgtttaatccagaaactaaacgtccatatactttaagtatgattgagaaa
cttatgcatggaattcactttgctgttgctcctcataacaactcaaagaaccaggccttg
ggagttatatgtgagcttcagaagcattatcccatcaaaagaacccgatccccaatgaga
ttacggctcatcattcctgaaaagtattcatgttctcttatggaaaagcttgatgcatgg
aatgcagaaattgtttcaaaagttgaatatggaaatcagcaatctttggtctgtgaggtg
gagcctattttttcccaagactgtgatgctttggttaggagtctctatggtagattagaa
atccttgccgtatcagtgcacttcgagaaggatgccgatgttgttgacgattgcgaggac
tgggacgacattgaaccagtaagcattgcagagttagatgacgatgaccaatgggacgtt
attgaaccaggtcatcattctccagtaccactaaacactgcagagttagatgaccactgg
gacgtcattgaaccaagtcatcatcctccagtacagccaagcactgcagagttagatgag
atcaagttaagtgaggtattacagaaacagtccatttccacaggaaatggagccgataag
aaacagttgatttccacaagaaatgatggagctgataagagaagtgctgaagttgaagta
gtagaggtgaagcaaagaaaatgtagtatctgcaatgcgctagtgggggatgctaagcaa
tttcgctaa
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