Papaver somniferum (opium poppy): 113279444
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Entry
113279444 CDS
T05758
Name
(RefSeq) DNA damage-binding protein 1
KO
K10610
DNA damage-binding protein 1
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03420
Nucleotide excision repair
psom04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113279444
09124 Replication and repair
03420 Nucleotide excision repair
113279444
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psom04121
]
113279444
03400 DNA repair and recombination proteins [BR:
psom03400
]
113279444
Ubiquitin system [BR:
psom04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
113279444
DNA repair and recombination proteins [BR:
psom03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
113279444
TCR (transcription coupled repair) factors
Cul4-CSA complex
113279444
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
Beta-prop_RSE1_1st
CPSF_A
Motif
Other DBs
NCBI-GeneID:
113279444
NCBI-ProteinID:
XP_026383926
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All DBs
Position
1:complement(13509455..13519483)
Genome browser
AA seq
1089 aa
AA seq
DB search
MSLWNYVVTAHKPTNVTHSCVGNFTSPHELNLIVAKCTRIEIHVINAQGLQAVLDVPIYG
RIATLELFRPHGEAQDFLFIATERYKFCVLQWDAESSELVTRAAGDVSDRIGRPTDNGQI
GIIDPDCRLIGLHLYDGLFKVIPFDSRGQLKEAFNIRLEELQVLDIKFLFGCSKPTVVVL
YQDNKDARHVKTYEVALKEKDFSEGPWSQNNLDNGAGLLIPVPMPLGGVIIIGEETIVYC
SAVVFKAIPTRPSITRAYGRVDADGSRYLLSDHAGLLHLLVITHEKERVTGLKIELLGET
SIASTISYLDNAIVYVGSSFGDSQLVKLNLHPDAKGSYVEVVERYVNLGPIVDFCVVDLE
RQGQGQVVTCSGAYKDGSLRIVRNGIGINEQASVELQGIKGMWSLRASTDDPYDTFLVVS
FISETRILAMNLDDELEETEIQGFDSEVQTLFCHDAVNNQLVQVTASSVRLVSSTSRDLL
DEWKAPVGFSVNVATANSSQVLLATGGGHLVYLEIGDGKLAEAKYAQLEYEVSCLDINPI
GENPNFSQLAAVGMWTDMSVRIFSLPDLDLIRKEQLGGEIIPRSVLLCAFEGVSYLLCAL
GDGHLFNFLLNVNTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL
LYSNVNLKEVSYMCPFNTAPYPDSLAIAKEGELTIGTIDDIQKLHIRTIPLGEHAKRICH
QEQSRTFAICTMKYCQSSNEDSEMHFVRLLDDQTFDIISFYPLDTYEYGCSILSCSFADD
TNFYYCVGTAYVLPEESEPTKGRILVFVVEDGKLQLIAEKETKGSVYSLNSFNGKLLAAI
NQKIQLYKWMLRDDGSRELQLECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG
AIEERARDYNANWMTAVEILDDDIYLGAENNFNLFSVRKNSEGTTDEERARLESVGEYHL
GESVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPQEHYLFLEKLQSNLVKV
IKGVGGLNHEQWRSFNNEKKTVDAKNFLDGDLIESFLDLSRNRMEEISAAMSVSIEELCK
RVEEMTRLH
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgagtttatggaattacgtagtaacagctcacaaacccaccaatgttactcattcatgt
gtaggaaatttcacttcccctcacgaacttaatctcatcgttgcgaaatgtactcgtatt
gagattcatgtcattaatgctcaagggttacaggctgtactggatgtgccaatatacgga
agaatcgcaacactcgagctttttcgccctcatggagaagctcaagattttttatttatt
gctaccgagagatataagttttgcgttttacagtgggatgcagagtcatctgaacttgtg
accagggcagcaggtgatgtctcggatcgcattggtcgtcctaccgacaatgggcagatt
ggtatcatagatcctgattgcagattaatcggtctgcatctttatgatggcttattcaag
gttatacccttcgatagtagagggcagctgaaggaagcatttaacataaggcttgaggag
cttcaagttttggatataaaattcctctttgggtgttcgaaacccacagttgttgttctt
taccaggacaataaagatgcgagacatgttaaaacatatgaggttgcactcaaggaaaaa
gacttctcggagggtccatggtcacagaataatcttgataatggggctggcttgttaatt
cccgtcccaatgcctcttgggggtgttatcattattggagaggaaacaattgtttattgc
agtgccgttgtatttaaagcaatcccgaccagaccttcgattacaagggcctatggaagg
gttgatgcagatggctctcgttacttactcagtgatcatgcaggtcttcttcacttactt
gtgattacccatgagaaagaaagagtaactggtctgaaaattgagctcttgggtgagaca
tcaattgcatctacaatatcttaccttgacaatgcaatcgtgtacgttggctctagcttt
ggagactcgcagcttgtaaaactaaatctccaccctgatgcaaaaggctcatatgtagaa
gtcgtagaaagatacgttaatttgggacctatcgtggatttctgtgtggttgacctagag
aggcagggccaaggtcaggtcgtaacttgttctggagcgtacaaagatggttctttacga
atagttcggaatggaatagggatcaatgaacaggcatcagtagaacttcaaggcatcaaa
ggaatgtggtctttaagagcatctactgatgatccttatgatacctttttggttgtgagt
tttatcagtgagactcgaatattggcaatgaatttggatgatgagttagaggaaacagag
atacagggttttgattcagaggttcaaactctattctgtcatgatgctgtaaacaaccag
cttgtacaagttactgcaagctctgtacggcttgtcagctctacatcacgtgatctcctt
gatgaatggaaagctccagtgggattttcagttaatgttgccacagcaaattccagtcag
gttttattggcaactggaggtggccatctagtttacctagaaattggtgatggtaaattg
gctgaagccaaatatgcgcagttggagtatgaggtgtcctgccttgacataaacccgatt
ggtgaaaaccctaacttcagtcagctagcagcggttggtatgtggacagatatgagtgtt
cggatattttcccttcccgaccttgatctcataagaaaggagcaactgggaggagagatt
attcctcgctctgttcttctgtgtgcctttgaaggggtctcatacttgttatgcgccctt
ggagacggacacctgtttaattttctgttgaacgtgaataccggcgaattaacagatagg
aaaaaagtctcacttggaactcagcctataacgctccgtacgttttcttctaagaacaca
acacatgtgtttgctgcatcagataggcctactgttatatacagtagtaacaaaaagtta
ctctacagtaatgtgaacttgaaagaagtaagctatatgtgtccattcaacactgctcct
tacccagacagccttgctattgcaaaagaaggtgaacttactattgggactatcgacgat
atccaaaagctgcatatacgtacaattcctctgggagagcatgcaaagcgtatctgtcac
caagagcaatcccggacctttgcgatctgcactatgaaatactgccaatcgagcaatgaa
gattctgaaatgcacttcgttcgattgttagatgatcagacatttgacatcatatctttt
tatccgcttgatacatatgaatatggttgttctatcctcagctgttcgtttgcagatgac
actaatttttattactgcgtgggaactgcatatgttttgcctgaggaaagtgagccaacc
aagggtcggatactagtttttgtagttgaagatgggaaactacagctaatcgcggagaag
gaaacaaagggttcagtttactctttaaattcattcaatggaaaacttcttgctgctatt
aatcaaaagattcaactgtataaatggatgctgcgggatgatggctcccgtgagttgcag
ttagaatgtggtcatcatggacacattctcgctctctatgtccaaacccgtggagatttc
attgttgttggtgatttgatgaaatcaatctcgctgctaatatataagcatgaagaagga
gctatcgaggagcgggctcgtgactacaatgcaaactggatgaccgcagtcgagatcctc
gatgacgatatctatcttggagctgagaacaatttcaacttattttctgtcaggaagaat
agtgagggtacaactgatgaagaacgagcaaggcttgagtctgttggtgaataccacctt
ggtgaatccgtgaaccggttcagacacggttcgcttgttatgcgtctccctgattctgac
gtgggtcagattcctacagtcattttcggcactgtcaatggcgtgattggagttattgca
tcacttccacaggagcattacctattcctagaaaagttgcaatcaaacttggtcaaggtc
ataaagggtgttggggggttgaaccatgaacaatggcgatctttcaacaatgaaaagaag
actgtagatgccaagaacttcttggacggggatttgattgaatcattccttgatctaagc
cggaaccgaatggaagagatctcagcagccatgagtgtttcaattgaggagctctgtaag
agagtagaagaaatgacaaggttgcattga
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integrated database retrieval system