KEGG   Papaver somniferum (opium poppy): 113280918
Entry
113280918         CDS       T05758                                 
Name
(RefSeq) cleavage stimulation factor subunit 50-like
  KO
K14406  cleavage stimulation factor subunit 1
Organism
psom  Papaver somniferum (opium poppy)
Pathway
psom03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:psom00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    113280918
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psom03019]
    113280918
Messenger RNA biogenesis [BR:psom03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     113280918
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_WDR3_2nd WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd WDR55 WD40_Gbeta EIF3I Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st Beta-prop_EML ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_Aladin WDR90_beta-prop_4th Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Cytochrom_D1 Beta-prop_NWD2_C Beta-prop_SCAP Ge1_WD40 Beta-prop_DCAF4 Beta-prop_NOL10_N Beta-prop_WDR41 Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_VPS8
Other DBs
NCBI-GeneID: 113280918
NCBI-ProteinID: XP_026385313
LinkDB
Position
5:complement(4704149..4709797)
AA seq 439 aa
METSLEQILQDGKLLRQVNDLIVAHLRDNNLNQAAIAVASATMTPLNVESPPNKLIELVA
KGLAVERDEAFRGVAPAAALFDYGSAAIPAGYGLVPPPRITSVDFSAVQDTKGASKSFPK
HETRHVSEHKNVARCARFSPDGRYVATGSADTSIKLFEISKIKQMMLPDTRDGPVRPVIR
TFYDHLQPVNDLDFHPQSTILISGAKDHTIKFFDFSKTAAKRAYRVIQDTHNVRSVSFHP
SGEFLLAGTDHSIPHLYDINTFQCYLSANAPEIGGNGAINQVRYSSTGGTYVTASKDGAV
RIWDGVTAQCVRSMVGAHGSAEATSASFTKDQRFVLSCGKDSAVKLWEVGTGRLVKQYVG
ATHTQLRCQAVFNETEEFVLSIDEPSNEIVVWDALTAEKVARWPSNHTGAPRCLEHSPTE
SAFISCGTDRSVRFWKETL
NT seq 1320 nt   +upstreamnt  +downstreamnt
atggagacaagtttagaacagattttgcaagacgggaagttgcttcgtcaggttaatgac
ttgatcgttgcacatcttcgcgacaacaacctcaatcaggctgccatagcggttgcttcg
gctacaatgacaccattgaatgtggaatcacctccaaacaagcttatcgagcttgtagca
aagggacttgcagtggaaagggatgaggcattcaggggagttgctcctgcagctgctctc
tttgattatggttcagcagctatacctgctggatatggattggtccccccacctcgtatt
acttctgttgatttcagtgctgtgcaggatacaaaaggggcttccaagagtttcccaaaa
cacgaaactagacatgtttcagagcataagaatgttgccagatgtgcaagatttagtcct
gatggacgatatgttgcaactggaagtgctgacacgtcaattaagctatttgagatttca
aaaatcaagcaaatgatgttgccagatacaagagatggtccggtgcgacccgtaataagg
acattctatgatcatttgcagccagtaaatgatttggatttccatcctcaatctactata
ttaatatctggggccaaagatcacactataaagttcttcgatttctcaaaaacagcggcg
aagagagcttatcgagttattcaggatactcacaatgtgagatctgtatcttttcatccg
tcaggggaatttcttttagcagggacggatcattcaattccacatctgtatgacataaac
accttccaatgttacctatcagcaaatgcaccagaaattgggggtaatggcgcaatcaat
caggtcaggtattcatctaccggtggcacctatgtaacagcttctaaagatggtgctgtg
aggatttgggacggggtaaccgcacaatgtgtgcgctccatggttggggcacatgggtca
gctgaagccaccagtgcaagtttcaccaaggaccaaagatttgttctctcctgcgggaag
gactccgcagtgaaactttgggaggttggtacagggagactagtcaaacaatacgttgga
gctactcatacacaattgcgctgccaggctgttttcaatgaaacggaagagtttgtacta
tccattgatgaaccgagcaatgagattgttgtctgggacgctttaactgctgagaaagtt
gcaaggtggccgtctaaccacactggcgcaccacgttgtctggagcattcaccaactgag
tcagcctttatctcatgtgggactgacaggtcagttcgattctggaaggaaacactttaa

DBGET integrated database retrieval system