Papaver somniferum (opium poppy): 113280979
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Entry
113280979 CDS
T05758
Name
(RefSeq) DNA-directed RNA polymerase III subunit 1-like
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
113280979
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psom03021
]
113280979
Enzymes [BR:
psom01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
113280979
Transcription machinery [BR:
psom03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
113280979
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
113280979
NCBI-ProteinID:
XP_026385392
LinkDB
All DBs
Position
5:complement(10264340..10276310)
Genome browser
AA seq
1429 aa
AA seq
DB search
MATTARHSEAQAQFQFTKQPYVEDVGPRKIQSIKFSMMSGPEIMKASEVQVYDSGFYDQN
RKPKKNALLDSRMGPAGSKMGIICETCHGDFVNCPGHYGYLHLCLPVFNVGYFNAILNIL
KCICKSCARILLSEKERVSYLKKMRNPKAEALQKTATAKAILKSCKPKTCSRCGYINAVV
KKAGTVMGIIHDRSKKFTDDTDKECKAALSGTKDSGTRIQILNPVRVLGLFKRILDQDCE
LLYLSDRPEKLIITDILVPPIAIRPSSFVDGGRSNEDDITSKLNTIIQTNASLRQDLDGK
KSTSQCLGDWELLQVEVAQYINSEVRGVPLSMMQSSKPLRGFVQRLKGKQGRFRGNLCGK
RVEYTARTVISPDPNLKITEVGIPILIAQTLTYPELVSQHNIEKLRKCVVNGAYKYPGAK
SIISAGSVRILNRRRKSDAYGLKFGDIVERHLEDGDVVLFNRQPSLHRMSIMCHRAKIMP
WRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVAST
QDFLTSSFLITRRDTFYDRASFALMCTYMGDAIESVDLPAPALIKPVELWTGKQLFSVLV
RPRAQMRVYVNLTVTEKSYKQGKETLCPNEGFVYFRNSELICGQVGKATLGNGNKDGLFS
VLLRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDIQPGESLRKEIQDRIKKEKQEND
ALVQKYKNGQLQVQPGCDAAQTLESELTYLLNGVREKTGKICMGTTEQNKKVDEKVKLHW
RNSPLIMSQCGSKGSPDNISQMIACVGQQSVGGRRASNGFIDRNLPHFPKNSTAPDARGF
VENSFYTGLTPTEFFFHTMAGREGLVDTAVKTADTGYMSRRLIKALEDLSIQYDNTVRSA
SGRVIQFIYGDDGMDPSKMEGKDGSPLNFDRLYMKAKATCPARGHSSLSPTEIKKLADSR
LSELIMTPEGGFKEGEEAFSEGKEAFKKSLLDEEAFKEGKEGGFLYKCITSLTNTRKGLQ
LDEEKMGSQSLEKVSANVAGITLQQLQVFLETCISRYYTKRIEAGTAIGAIGAQSIGEPG
TQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKNISTPIITAKLESDRDVRSARMVKGCI
EKTVLGEIAKSIKIVLETREAYILVTLDMELMRCSQLKISAYSVRESLLGHHKLKLSPSK
SKLYPEKYVEVLDYRSLKIRSPEKDRTKIHFALHSLKSMLPEVVVMGIPTVERVIVSEKQ
KKGKGTGEYEVFVEGTNLRAVMGIPGVNGEETTSNHIIEVQETLGIEAARRCIIEEIQHI
MKEYRMSIDVRHMMLLADVMTSNGEVLGITRFGIQKMKESVLMLASFEKTQDHLFNGSLN
GRVDMIEGVSECIIMGIPMQLGTGILKVRQRVEHLPQLDYGGEPILSCT
NT seq
4290 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgactgcaagacactcagaagctcaagctcaattccagtttacgaagcaaccg
tatgtcgaagatgttggacctaggaagattcaaagtataaagttctcaatgatgtctgga
ccagaaatcatgaaagcttctgaagttcaagtgtatgatagtggtttttatgatcaaaac
agaaagcctaagaagaatgcattgctcgattctcgtatgggtcctgctggtagcaaaatg
ggtatcatttgtgaaacatgccatggcgattttgtgaattgcccaggacattatggatat
ttgcatctttgccttccggtgttcaatgttggatacttcaatgcgattcttaatattctt
aaatgcatatgtaagtcatgtgctcgaatactactgtcggagaaagaacgtgtaagttac
ttaaagaagatgaggaatcccaaagcggaggctttgcagaagactgccacagccaaggcg
atattaaaaagttgtaaacccaaaacatgcagcagatgcggatacatcaatgctgtagtg
aaaaaagcaggaacagttatgggtattattcatgaccgaagcaaaaaatttacggatgac
acagataaagaatgcaaagcagcactttctgggacgaaagattctgggacacgtattcaa
attcttaaccctgttagagttcttggtctctttaaaagaatactggaccaggactgtgaa
ctactatatctcagtgataggcctgagaaacttattattacagacattttggtgcctcct
atagctatccgtccttcttcttttgtagatggaggaagaagtaacgaagatgatatcact
tctaaacttaataccattattcaaacaaatgcttccctccgacaagacttagatggcaag
aagtccacttcccaatgtttgggtgattgggaactactccaagttgaggttgcacaatat
atcaatagcgaagtccgcggtgtccccctaagtatgatgcagtcctcaaaaccattacga
gggttcgtccaacgtctcaaagggaaacaggggcgctttcgtgggaacttgtgtggaaaa
cgtgttgagtatactgccaggactgttatttcccctgatcctaatcttaaaattacagag
gtgggcatacctatcttgattgctcaaaccttaacatacccagaactagtgtcccagcac
aacatagagaagttaaggaaatgtgttgtcaacggtgcttataaatatccaggagcaaaa
tctattatatctgctggttcagtgaggattctgaatagaagacgaaaaagtgatgcttat
ggactcaaatttggagacattgtagaaaggcatctggaagatggggatgttgtgttattt
aatcgtcagcctagcttgcatcgcatgtctataatgtgtcatagggcgaaaataatgcct
tggagaacattgaggttcaatgaatctgtttgtaatccatacaatgctgacttcgatggt
gatgagatgaatatgcatgttcctcaaacagaagaggctcgcacagaggctctcatgctg
atgggggtgcaaaataacttgtgtacaccaaaaaatggagaaattttggtcgcatctact
caagattttctaacatcttcctttctcattacacggagggatacattctatgatcgtgca
tcctttgcgcttatgtgtacttatatgggtgatgcaatagaatctgttgatttgccagca
ccggctttaattaagccagtagagctttggactgggaaacagctattcagtgttctagtt
cgccctcgtgctcagatgagagtctatgtaaatcttactgttacagaaaaatcttacaag
cagggcaaagaaacattgtgtccaaatgaagggtttgtctattttcggaacagtgaactt
atttgtgggcaagttggtaaagctactttaggaaatggcaataaagatggacttttttct
gttcttcttagagattataatgcacatgctgctgctgcttgtatgaaccgtctagcgaaa
ttgagtgctcgctggattgggaaccatggtttctcaattggtattgatgatatccaacct
ggagagtctttaaggaaagagatacaagataggatcaaaaaggaaaaacaagaaaatgat
gcacttgttcagaaatacaaaaacgggcaacttcaagttcaaccaggttgtgatgccgct
caaacattggaatctgagttaacatatcttctcaatggagttagagagaaaactggaaag
atttgtatgggaaccacggaacaaaacaaaaaagtagatgaaaaagtaaaactgcattgg
aggaacagccctctgattatgtcgcagtgtggatccaaagggtccccggataatatcagt
cagatgattgcatgtgttggtcagcaatcagttgggggtcgccgtgcttctaacggcttt
atcgacagaaatcttccccacttccctaagaactcaaccgcaccggatgctagaggtttt
gtcgagaactcattctacactggcttgactcccactgagtttttctttcatacgatggca
ggacgtgaaggtcttgtggatactgcggtgaaaactgctgacacaggttacatgtctcgt
agactgatcaaagcgttggaagatctctcgattcagtatgataatacagttcgcagtgct
agtggtcgtgtcatccaatttatttatggagatgatggcatggatccctctaaaatggaa
ggaaaggatggatctcccttaaattttgatagattgtacatgaaagcaaaggctacctgc
cctgctagaggtcattccagcttgtctcctacggagatcaaaaagcttgctgattctaga
ctctcagaactgataatgaccccagaaggtggtttcaaggaaggggaagaagctttcagt
gaagggaaagaagcttttaagaaatctctcctggatgaagaagctttcaaggaagggaaa
gaaggtgggtttctttacaaatgcatcacttcgttaacgaacacaagaaagggtttgcaa
ttagatgaagagaaaatgggctctcagtctctagaaaaggtctctgcaaatgtagctgga
attactttgcaacaattacaggtcttcttggaaacctgtatttctcgttactatacaaag
agaatcgaagctggaactgcaattggagctattggagctcaaagtataggagaacctggg
acacagatgactttaaaaacattccactttgctggagttgctagcatgaatgttacactt
ggagttcctcgcatcaaggaaattataaacggtgctaaaaatataagtacacctattatt
actgctaaacttgagagtgatagagatgttagatctgcacgcatggtgaaaggctgtatc
gagaaaacagtgcttggcgagattgctaaaagcatcaaaatagttctcgaaacacgcgaa
gcatacatacttgtaacgctggatatggaattgatgcggtgttcacaattgaagatttct
gcttacagtgtacgagaatctctcttgggtcatcataaattaaaattaagtccttcaaaa
tcaaaattatatccagaaaagtatgttgaggtactggattatagaagtctgaaaattcgt
tctcctgagaaagatagaaccaagattcactttgcactgcactctttgaaatccatgctt
ccggaagttgttgtaatgggcattccaacagttgagcgtgtaattgtaagtgaaaaacag
aaaaagggcaagggtacgggcgagtacgaggtgtttgtggaagggacaaatcttcgagct
gtcatgggaattccaggggtcaatggagaggaaacaacaagcaaccatatcatagaagtc
caagaaactctcggaattgaggctgcaagaagatgtataattgaagaaattcagcacatc
atgaaagaatatagaatgagcatagatgttcgccacatgatgctcctagcagatgtgatg
acatctaacggtgaggtgctaggaatcacaagatttggtatccaaaagatgaaggaaagc
gtgcttatgttagcgtcatttgagaaaacacaagatcatctcttcaacggttccttaaat
ggaagagtggacatgattgaaggagtgagtgaatgcatcattatgggtataccaatgcaa
ctaggcactggaatactaaaagtccggcaaagagttgagcatctaccacaactggattac
ggcggggaaccaatcctatcgtgcacatga
DBGET
integrated database retrieval system
