Papaver somniferum (opium poppy): 113281008
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Entry
113281008 CDS
T05758
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit B-like
KO
K03253
translation initiation factor 3 subunit B
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psom03019
]
113281008
03012 Translation factors [BR:
psom03012
]
113281008
Messenger RNA biogenesis [BR:
psom03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
113281008
Translation factors [BR:
psom03012
]
Eukaryotic type
Initiation factors
eIF-3
113281008
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF2A
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_ELP1_1st
RRM_1
WD40_Prp19
Motif
Other DBs
NCBI-GeneID:
113281008
NCBI-ProteinID:
XP_026385422
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All DBs
Position
5:complement(13620730..13624852)
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AA seq
720 aa
AA seq
DB search
MVEGMSMTDIEAIGNRLGIDIRQIDLDSIQLPPGEDFGIPSDDEEKLRQEDSLEFESGFG
NIIVVDNLPVVPPEKYDKLEGVVKKIYSQIGIIKEDGLWMPVNPETQKTLGYCYIEYNTP
QEAELAKERTHGYKLDKAHIFAVNLFDDFDKFMKVPDEWAPPEIKPYAPGENLQQWLTDE
KARDQFVIRAHHDTEVFWNDPRQSMPVPVYRRQYWTESFVQWSPLGTYLATVHRQGAAVW
GGAATFDRLSRYAHPQVKLIDFSPGEKYLVTYSSHEPSNPRDTHRVILNIFDVRSGKVMR
DFKGSADEFATGGTGGVSGVSWPVFRWGGGTDDKYFAKLGKNVISVYETETFTLIDKKSL
KVENVLDFSWSPADPIIALFVPELGGGNQPARVSLFQIPGKEELRQKNLFSVSDCKMYWQ
SNGEYLAVKVDRYTKTKKSTYSGFELFRIKERDIPIEVLELENKNDKIMAFAWEPKGHRF
AVIHGESSRTDISFYSMRTATNTGRVSKLTTLKGKNANALYWSPSGRFVLLAGLKHLNGQ
LEFYNVDELETMATGEHFMATEIEWDPTGRYVATAVTSIHEMENGFNIWSFNGKLLYRHS
RDHFYQFLWRPRPPSLLTAEKEEEIAKDLKKYSKKYEIEDQDVSNQLSEQDREKRRKLQE
SWESWIMKWKQIHEEEKLERQHLRDGEASDDEEEYEAKEVEVEEILDVKEEIIPYEFDQE
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggtggaaggtatgtcgatgacagacattgaagctattggaaatagacttggaattgat
attagacaaattgatctagattcgattcagttaccacctggtgaagattttggtattcca
agcgacgatgaagaaaaactccgtcaggaagatagtttagagtttgaatcaggatttggt
aatataattgttgttgataatcttccagtagttcctcccgagaaatatgataagttggaa
ggcgttgttaaaaagatttacagtcagattggtattattaaggaagatgggttatggatg
cctgttaatcctgaaacacagaaaactctaggttattgttacatcgaatataatactcct
caggaagctgagcttgccaaggagaggactcatggctacaaattagacaaagcccatata
tttgcagtcaacttatttgatgacttcgacaaattcatgaaagttcccgatgaatgggct
ccacctgaaattaagccatatgcacccggggaaaatctacaacaatggttgactgatgaa
aaagcacgtgatcagtttgttatacgtgcacatcatgatactgaagtcttttggaacgat
cccaggcaatccatgcccgttccagtttatcgccgtcaatactggactgagagttttgtt
cagtggtctccacttgggacatacttagccactgttcaccgacaaggtgctgcagtgtgg
ggtggtgcagccacctttgatcgcctttcacgatatgcccatccacaggttaagctcatt
gatttctctcccggggaaaaatatttggttacatatagcagtcatgaacctagcaaccct
cgtgatacacatagggttatcttgaacatttttgatgtacgttccggtaaagtaatgcga
gatttcaagggaagcgctgatgagtttgcaactggtggaacaggtggtgtatcgggagtc
tcatggcccgtttttagatggggtggtggaacagacgataagtattttgccaaacttgga
aagaatgtcatctctgtatatgagacagagactttcactcttattgataagaagtctttg
aaggttgaaaatgtgctcgacttcagttggtcacctgctgatcccatcattgctctcttt
gttcctgaactaggtggaggcaaccaacccgctagagtgagtctttttcaaattcctggt
aaagaggaactcaggcagaagaatctcttcagtgtcagtgattgcaaaatgtactggcaa
agcaatggagaatatcttgcagttaaggttgacaggtataccaaaaccaagaaaagtaca
tattctggttttgagcttttccgaatcaaagaaagagacattcctattgaggttctcgag
ctggagaacaaaaatgataagatcatggcttttgcttgggagcctaaaggacatagattt
gctgttatccatggtgaatcttccaggacagatattagcttttactcgatgcgaactgct
acaaatactgggcgtgtttcaaagctcacaacgctaaaaggaaagaatgcaaatgcgcta
tattggtcaccttctggccgtttcgtacttcttgctgggttgaaacatctcaatggacag
ttggaattctacaatgttgatgagcttgaaaccatggccactggggagcattttatggca
acagaaattgaatgggatcccactggaagatatgtcgcaactgctgttacttccattcat
gaaatggaaaacgggttcaacatctggtctttcaacggaaagctactgtacaggcactca
agggatcatttctatcagtttttgtggcgcccaaggccaccatctttgttgactgctgaa
aaagaagaagaaattgctaaggatctcaagaaatacagcaagaaatatgagattgaagac
caagatgtcagtaatcaattgagcgagcaggacagagaaaaacgaaggaagctacaagaa
tcatgggaatcttggatcatgaaatggaaacaaattcatgaagaggagaagttagagagg
cagcacttaagagatggtgaggctagtgatgatgaggaagaatatgaagccaaagaagtt
gaggtcgaggaaattttggatgttaaagaagagattattccatacgagtttgaccaagag
tag
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