Papaver somniferum (opium poppy): 113281080
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Entry
113281080 CDS
T05758
Name
(RefSeq) uncharacterized protein LOC113281080 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psom03019
]
113281080
Messenger RNA biogenesis [BR:
psom03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
113281080
Surveillance factors
Other surveillance factors
113281080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
Motif
Other DBs
NCBI-GeneID:
113281080
NCBI-ProteinID:
XP_026385512
LinkDB
All DBs
Position
5:complement(17925586..17933969)
Genome browser
AA seq
1624 aa
AA seq
DB search
MANNDKFDLPEDLLSLKSSDLPWASSSKEISGGHYDEKGMMAFLDETKDQGTLDNVIPLS
PQWLHAKTSETKTGISGMPGEIRATNPMSHGNSIDSVLKEGWRLDGSQDKKDWRRNAPDA
DNSLRWREEERETGLLGRRDRRKEDRRPDNGSSRETADTRVLPSPDRWLDAGNRNSGQET
RRDGKWSSRWGPEDKEKDSRTDKRLDVEREDTQNEKQLLGSSRATPDREIESRDKWRPRH
RLEVHSAGSSVYRAAPGFGLERGKVEGSKVGFAPGRGRSSIIGRPSSACPIGAPPADTHG
KSGVPGVSFHYPRGKLLDIYRKQKPTSNDIPDGLKEVSSMGQSGLVEPLAFVAPSIEEGA
VLNDIWNGKITGSGVFSDSSRDKMTSEGVTGDPYLKEGEYSFSAEVGKIDQSDGLTTTFL
KVDDASNVRQLDRSHHNDVQSRVSACIKHVTSEDFESSDSLNVGTKLPDEPTSLINLPIF
QNSDSNNIKNGEPNVLERGPSPEGMSLYYRDPQGETQGPFLGADIISWFDQGFFGPDLLV
CPADAPEGTPFQELGEVMPQLKLKPWSDSATTPFSSVEPCDAVGSFDQPAPTMVPDFMGL
TVSGDQNWGTSEFNNLSAAQMHSLISKSEDPVEPHYSEVERFHEFIAQNEESMLSGRSDC
SSEIPVGEPSGTVHDNLTSFTSHPFLSNDNQLHNRTGRPELAEPNMPQLKDNQLHPFGLT
WSELESVPSRHVQSSSMLSGISDQGHFINPTAGRDVSLPIHRQSSFGAVSDSPHGGEAWG
DSYRRNLLSNTNPLLDYSDARHLSRLEQDNNHFLTEQLMAQQLQQQNQHKNLMSSHSSQY
LNGSFLEQLPSSAMSEGRIPLHHQQHNPDLEHLMKFRFQRQRQYQLQQQQLQQQQKLQQQ
QQLQHQMQLQQQQQQQSKVQQYVLEQLLHQQLHDPGFGQSRIDHHRGNNMLDQALLRQQH
LHELQQHHSLSSATADPSLEQLIQAKYGQRIQQEQQSDILELLSRAKHGQLHPLEHQALL
QQEQLHARQISMALRQQMGLEEERHVSDIWPADESAQFIRSVAGSHQAHSAGIGSLDLYQ
RQQRFAEEQASLLERNRAIQERLQRRPYEPSALPFERSSSLPTGGPAMNLDALNAFPHPQ
IQDMPDWHTQAHVSGQAGSFSSGMHSQQPQVPSQFKASHLDGIGSQWSESKGHQDNRWIE
ARIQKLKLESEQYRRQLEVNSLPSEEQSSWVPTGGTDESSKQASFDALHQKLGVHSTQPL
QMGDVVPASSFERRDPSWPFPGSSSSEHVFNLFGGQEEGNSFAEVPHGSDSTNLLQDQFI
RLGMDEQSSCLESSEIKLHEHNTGILPEEEHFVSGMSEIPQSTQADTNTTETSEDKDLTD
EKDDKKGKKRGSKNKGSTNKTSLELQEGMAEQAKPSAIQRVELPANTPVRHTSLGTTGGN
AGTHNYEMGMDSRAREDTTKGRISSAISKGQDNTPMRRPPVSRVLSSQEALSDMASVSTA
GKSSMSSVPLHDGGKRIAGGNPVNHLPATVAAGNKKDVMAFRRTSSCSDASDVLETSFID
MLKSNSKKPSVPDSDAGMSELSDAGAGRGGKKKGKKGRQIDPALLGFKVTSNRIMMGEIQ
RLDD
NT seq
4875 nt
NT seq
+upstream
nt +downstream
nt
atggcgaataatgataagtttgatttaccagaagatctcctttctttgaaatcttctgat
ttaccttgggcttcttcttctaaagaaatttcaggtggacattatgacgaaaaggggatg
atggcatttctggatgagacaaaagatcaggggacactggataacgtcataccattatct
ccccaatggcttcatgctaaaacaagcgaaactaagacaggaatatctggcatgccaggg
gaaataagggccacaaaccccatgtctcatggtaactcaatagattcggttctgaaagaa
ggttggcgtctggatgggtctcaggacaagaaggactggagaagaaacgcacctgacgct
gataatagtctccggtggcgtgaagaagagagagaaactggattactaggtagaagagat
cgtagaaaagaagatcgacgtcctgacaatggctccagtagagaaactgctgatactcga
gttttgccttcccctgataggtggcttgatgctggtaatcgtaattctgggcaggaaaca
cgacgagatgggaaatggtcttcaagatggggacctgaagataaagagaaggattctcgc
actgataaaaggttggatgtggagagagaagacacccagaatgaaaaacagttgcttggc
agcagtcgtgcaactccagaccgtgaaatagaatctcgtgataaatggaggccacgccat
cgactggaagttcattctgctgggtcttcagtttatcgtgctgcacctggatttgggctt
gagagaggaaaggtggagggttcaaaagtaggatttgctcctggtcgtgggaggtccagc
attattggcaggccttcgtctgcttgtccaattggtgctccccctgcagatacacatgga
aaatcgggcgtgcccggggtatcatttcactaccctagaggaaagcttcttgatatttat
cggaaacaaaagcctacatctaacgatattcctgatgggttaaaagaagtgtcttcaatg
gggcaatcaggcttagttgagccgttggcgtttgttgcacctagtatcgaagaaggggct
gttctcaatgatatttggaatgggaaaattacaggcagtggagtgttttcagattcatct
agggacaagatgaccagcgaaggtgtcacaggggatccttatcttaaagaaggagagtat
agtttttctgccgaagttggtaagatagaccagagtgatggtttgacaacaacatttctg
aaggtcgatgatgccagcaatgtaagacagcttgacagaagtcatcacaatgacgtgcaa
tcgagagtgtctgcatgtattaagcatgttacatccgaagattttgagtcttctgattcc
ttgaatgttggcacaaaattacccgatgaacctacttctttaattaatcttccaattttc
cagaattctgatagcaacaatattaagaatggagaaccaaatgtattagaaaggggtccc
tcacctgaggggatgagtttgtactacagggatcctcaaggggagactcagggcccattt
ttaggtgctgacatcatttcatggtttgatcaaggcttttttgggcctgatttactggtt
tgtccggcagatgctccagaaggaacaccttttcaagaacttggagaggtcatgccacaa
ctgaaacttaagccatggtctgactcagctaccacccctttctccagtgtagaaccatgt
gatgctgttggcagctttgatcaacctgcacccaccatggttcctgactttatgggtcta
actgtttctggtgatcagaattggggaacatcagagttcaataatctttcagctgcccag
atgcattctttaatttcaaaaagtgaagatccagtggaacctcattactctgaggttgaa
cgctttcatgaattcatcgctcaaaatgaagaatctatgctatctggaagatctgattgt
agcagtgagattcctgttggggagccttctggtaccgtccatgataacttgacaagtttt
accagccatcctttcctttcaaatgataatcagttgcataaccgaacaggaagacctgaa
ttggcagaacccaacatgccacaactcaaagataatcagttgcatccctttggactaaca
tggtctgagctcgaaagtgttccatctaggcatgtccagtcgtctagtatgctgtctgga
ataagtgatcagggccattttataaaccctacagctggaagggatgtctctcttcccatt
cacaggcagagctcctttggagcagtatccgattccccccacggtggggaggcgtggggt
gatagttacagaaggaatttactttcaaatactaacccgctcctagattactcagatgct
cgccacttgtctcgcttggaacaagacaacaaccactttctgacagagcagttgatggcg
caacagttgcagcagcaaaatcaacacaaaaatctaatgtcttcacactcttctcagtat
ctgaatggatcatttttggagcaattacctagttctgctatgtctgagggaagaattcct
cttcaccatcaacaacataatccagatctggaacatcttatgaaatttcggtttcaacgt
cagcggcagtatcagcttcagcagcaacaattgcagcagcagcaaaaactgcagcaacaa
caacagcttcagcatcagatgcaattgcagcaacagcagcagcaacagtctaaagttcaa
cagtatgttcttgaacagctgctgcatcagcagctgcatgatcctggttttgggcaatca
cggattgatcaccatagaggcaataacatgctagatcaggcattactgaggcaacaacat
ctacatgagttgcagcaacatcattctttatcatctgcaactgccgatccttccttggag
cagttaatccaagccaaatacggacagcgcatacaacaggaacaacaaagtgatattctg
gagctcctatcacgagcaaagcatggccagttacatcctttggaacatcaagctcttctt
cagcaagagcagctgcatgcaaggcagatctccatggcattaaggcagcagatgggtttg
gaagaagagaggcatgtgagtgacatttggccagctgatgaatctgcacaatttatcagg
tctgttgctggctcccaccaggctcactctgcagggattggttccttggatctttaccag
cggcagcagagatttgccgaggagcaagcgagccttcttgagagaaaccgtgctatacag
gaacggctgcagcgtaggccttacgagccaagcgcactgccgtttgaaaggtcatcatct
ctccctactggtggtcctgctatgaaccttgatgctctaaatgctttccctcatcctcaa
attcaggacatgccggactggcatacccaggcgcatgtttctggtcaagcgggttcattt
tcgtcaggaatgcactctcagcagccgcaagttccttcacagtttaaggcctcacatctg
gatggaatagggagccagtggtctgagagtaaaggacatcaagataataggtggatagaa
gctcgaattcagaaactgaaacttgaatctgagcagtacagaaggcaattagaagttaac
agcttgccatctgaggagcaaagctcctgggtaccaacaggagggactgacgagagctca
aagcaggcttcgtttgatgcactccatcagaaactgggtgttcactctactcaaccatta
caaatgggcgatgtggttcctgcttcatctttcgagagaagggatccctcttggcccttt
cccgggtccagttcatcagagcatgtatttaatttgttcggaggtcaagaagaaggcaat
tcttttgcagaagtacctcatggctctgattcaaccaacttattgcaggatcagtttata
cgcttgggcatggatgaacagtctagttgtttggaaagcagtgaaattaaactgcatgaa
cataatactgggatattgcccgaggaagagcattttgtttcaggcatgagtgagattcct
cagtctactcaagcagataccaacactactgaaacatcagaagacaaagacttgaccgat
gaaaaggatgacaaaaagggaaagaagcgtggctctaaaaacaagggttctactaacaaa
acctctctagagttacaggaaggcatggctgagcaagccaaacccagtgctatacaacgt
gtggagcttcctgctaacactccagtcaggcatacttctctcggaactactggtggaaat
gcgggcacccataattatgaaatgggaatggacagtagagctcgtgaagatacgaccaag
gggagaatatcttctgccatctccaaggggcaggacaacactccaatgaggcgtccacca
gtttcacgggttttgtcatcccaggaggctttatcagatatggcttctgtctcaactgct
ggaaagagttcaatgagttctgttccactccatgatggtgggaaacggattgccggaggg
aatcctgtgaaccatttaccagctactgtagcagctggtaataagaaagatgttatggca
tttcggaggacatcgtcatgcagtgatgcatcggatgttttagagacgtcgtttatagat
atgttgaagagcaactccaaaaagccttcagtaccagactcagacgcgggtatgtcagag
ttgtcagatgctggtgcaggtagaggtggaaagaagaaaggcaagaaaggaaggcaaatt
gatcctgctctccttggttttaaggtgaccagcaaccgtatcatgatgggtgagatccaa
cgtcttgacgactaa
DBGET
integrated database retrieval system
