Papaver somniferum (opium poppy): 113281774
Help
Entry
113281774 CDS
T05758
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus-like isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03013
Nucleocytoplasmic transport
psom03015
mRNA surveillance pathway
psom03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113281774
09122 Translation
03013 Nucleocytoplasmic transport
113281774
03015 mRNA surveillance pathway
113281774
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psom03019
]
113281774
03041 Spliceosome [BR:
psom03041
]
113281774
Messenger RNA biogenesis [BR:
psom03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
113281774
Spliceosome [BR:
psom03041
]
Complex C
Other components
EJC/TREX
113281774
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF592
Motif
Other DBs
NCBI-GeneID:
113281774
NCBI-ProteinID:
XP_026386401
LinkDB
All DBs
Position
1:27926280..27930664
Genome browser
AA seq
466 aa
AA seq
DB search
MDATDSAAVMKEASDSTAAGVVVAVSVEASVTVTQSVVTEFLCSNEEFQNKEADREPEVP
NHPFGGSMRSPSIQNSQVSEVIRDLGFQVKSESISTDCASIIENIELKDNLNADNFLIKQ
NVVMPEMVQPLSNDVSPDNGTLRSPVGQEPCENQDSMEGEFDETRAIVNLDKKNDDTDAS
LEKLNLDWSTGDESVEEHISESRHAESKHNSDEMREKNSLPEVNDVKEENHVGLTRDSVS
DKGISPEGKMSHGVPCEKQKLEDQEIDKNNKPSKRRRRWSSEAQKVPELQASTLKSCTTL
KNAFPSDAPKQSVAKSDSKLSPESAQGCVVPPSAKPPTTSLRIDKFLRPFTLKAVQELLA
KTGAVCSFWMDHIKTHCYITYSSVEEATETRNAVCNLQWPTYGGKLLFADFVDPRDVKMR
AEAPAAAPVSTTQKVLRQQHHYLPNHHLKLLSVKQSRGSNSHHHHH
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggatgctactgattctgcagcagtaatgaaggaggctagtgattctactgcagcgggc
gtggttgtcgcagtttctgtggaagccagtgtcacagtcacccagagtgtggttactgag
tttttatgcagtaatgaagaatttcagaacaaggaagctgatagggagcctgaggttcca
aatcatccttttgggggttcgatgcgtagcccgtccattcaaaatagtcaggtatctgaa
gttatccgtgatttagggtttcaagtaaagtctgagtctatttctactgattgtgcgtca
attattgaaaacatcgaactaaaggataatttaaatgctgataacttccttataaaacaa
aatgttgttatgccggagatggtgcaaccattatccaacgatgtttctccagataatgga
actctgcgttctccggttggtcaagagccgtgtgagaaccaggactctatggaaggggag
tttgatgagactagggctattgtgaaccttgataagaaaaatgatgatacagatgcctcg
ttggaaaaattaaatctggattggagtacaggggatgaatctgtggaggaacacatatca
gagagtaggcatgctgagtcaaaacataattctgatgagatgagagagaaaaatagccta
cccgaggttaatgatgtaaaagaagaaaatcatgttggtcttacgagggacagcgtttct
gataagggcatttctcctgaagggaagatgagtcatggtgttccttgtgagaaacaaaaa
ctcgaagatcaagaaattgacaagaacaataaaccttcgaagaggcggcgtaggtggagt
tcagaagctcaaaaagttcctgaactgcaagcctctactcttaaatcttgcacaacactg
aaaaatgcgtttccatctgatgcacccaaacagagcgttgctaaatctgactcaaaactt
agccctgaaagtgcacaagggtgtgtagttccaccatcagcaaagcctccgacaacttca
cttagaattgacaagtttctacggccattcactctaaaagcggtgcaggaacttctggca
aaaactggtgctgtatgcagtttctggatggaccacattaagacgcactgctatataacg
tattcgtctgtggaggaagcgacagagactcgtaatgctgtatgtaatttgcagtggcct
acctatggtggaaagctactgtttgctgattttgttgaccctcgagatgtgaaaatgcgt
gctgaagcacctgctgcagctcctgtcagcaccacccaaaaagtacttcgccaacagcac
cattatcttccaaaccaccatttgaagcttctttccgtcaagcagtccagaggaagcaac
tcccaccaccaccaccactaa
DBGET
integrated database retrieval system
