Papaver somniferum (opium poppy): 113281783
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Entry
113281783 CDS
T05758
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1B-like
KO
K15559
regulator of Ty1 transposition protein 103
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psom03021
]
113281783
Transcription machinery [BR:
psom03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
113281783
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CID
NDC80_loop
PspA_IM30
TEX13
DUF641
RICH
Rx_N
V_ATPase_I
IZUMO
Motif
Other DBs
NCBI-GeneID:
113281783
NCBI-ProteinID:
XP_026386420
LinkDB
All DBs
Position
1:27943334..27946344
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AA seq
501 aa
AA seq
DB search
MNSVFNEQILADKLSKLNNTQQCIETLSHWCIFHRTKAELVVATWEKQFHASEKAQKISF
LYLANDILQNSKWKGTEFVAEFWKVLPGALKDVHENGDDHGKTVVSRLVEIWEERRVFGS
RQSLKDLMLGKESLPPLELNKKRSRAVRIVKRDSRSIRTKLTVGGTAEKIVSAFHSVLSE
HPDEDLLMNNCKSAVHHVRKMEKDVDVACTKEGDPQRTTLANELQEEESVLKECIEKLKS
VEATRAALVSQLKEALHEQESELENVRTQLQVAMAQSEEACNMRKRLNNETDASSSADAN
SKSKTAASIAALVADKLTASTSSRQIMTSVLSSFAAQEAKGVGSVTTTTSNGTKPNMEKH
MAVMDSNVYITAQPPTAPTTPSYQTVVMHQPSPIQNQASTSQPLYHIMTTQPSQQQYLQP
PSGIMTGVTYSYGNLQPQQAPPQQAPPQPGPPQQQHMMNLAVAPYTQQQPTQLLQQPPVP
PSFRPLQPPAMLYYTRQHQPQ
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgaatagtgtgttcaatgagcaaatacttgctgataagctctctaagctcaataacacc
cagcagtgtattgagacactgtcacattggtgtatctttcaccggacgaaagcagaactt
gttgttgctacatgggagaagcaattccatgcttcagagaaggcgcagaaaatttcgttc
ttatatctagccaatgatatacttcagaacagcaaatggaaaggaactgaatttgttgct
gagttttggaaggttcttcctggggcactcaaggatgttcatgagaatggagatgatcat
ggcaagaccgtggtttccagattggtcgaaatttgggaagaaaggagagtatttggatct
cgtcagagtcttaaagatttaatgcttggaaaggaatcactccctccgctagagttgaac
aaaaaacgctcccgagctgttcgaattgtaaaaagagattctcgttccataagaacaaaa
ctgaccgttggaggcactgctgagaaaatagtatctgcatttcactctgtgctgagcgag
catcctgatgaagacttgctgatgaacaattgcaagtcggctgtccaccatgtgagaaaa
atggagaaagatgttgatgttgcctgtacaaaagagggagatccgcagaggacaacttta
gccaatgagctacaggaggaagaaagcgttttgaaagaatgcattgagaaactaaagtca
gttgaagcaactagagcagccttggtatctcaattaaaagaagcattacatgagcaggag
tctgaactggagaatgtgcgcacacaactacaggtagctatggcccagtcagaagaagcc
tgtaacatgcgaaagcggctcaacaatgaaacagatgcatcttcatcagccgatgcaaat
tcaaaatcaaagactgctgcatccattgcagctttggttgcggacaaattaacagcttca
acctcatcacggcaaataatgacttctgttctctcaagttttgccgcacaggaagcgaag
ggtgtaggttcagtaacgacaaccacttctaatggaacaaagccaaatatggaaaaacac
atggctgtaatggactcaaatgtttacatcactgcacaaccgcctaccgctcccacaact
ccttcctatcaaacagttgtaatgcatcaaccttcaccaatacaaaaccaagcttcaacg
tcacagcctctttatcacataatgacaacccagccttctcaacagcaataccttcaaccg
cctagtgggattatgactggagtgacgtattcttacggcaatttacaaccacaacaagcg
ccaccacaacaagcacctcctcagccaggtccaccacagcagcaacacatgatgaacctt
gcagttgcaccatacacacaacagcaaccaacacagctattacagcaacccccagtgcct
cctagctttcggccccttcaacctcctgcaatgttgtactacactaggcaacatcagcct
cagtga
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