Papaver somniferum (opium poppy): 113281891
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Entry
113281891 CDS
T05758
Name
(RefSeq) WD repeat and HMG-box DNA-binding protein 1-like
KO
K11274
chromosome transmission fidelity protein 4
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psom03036
]
113281891
Chromosome and associated proteins [BR:
psom03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
113281891
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mcl1_mid
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
WD40
Beta-prop_EML_2
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
Ctf4_C
WDR55
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
EIF3I
Beta-prop_EML
WD40_MABP1-WDR62_2nd
eIF2A
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_Vps41
Beta-prop_RIG_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_ELP1_1st
Beta-prop_HPS5
PEP5_VPS11_N
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
113281891
NCBI-ProteinID:
XP_026386579
LinkDB
All DBs
Position
5:72488536..72496579
Genome browser
AA seq
973 aa
AA seq
DB search
MKARSVKLKEAHQSNGSKSSCSIIWDLESQHLVTSSTSDTKISIHDALLPAKPPKLVSHH
KEGVTALALNPNSSCLASGSLDRSVSLYNFPGGKFQTNITRFTLPIRCLAFSKSGSLLAA
AGDDEGIKLINTIDNTIDRVLKEHKGPVTGLAFDPTGEYLASVDSIGTVIFWELSTRTPI
NILERVAPHYGTDTSVPNVLCWSPSGDVLAVPGLKNDVVMYDKDTAEKVGSLKGDHSESV
CFMSWSPNGKYMATSSLDKQILVWDVVKKQDINRQKFEDIICSMAWKPTGNALAVIDVMG
KYGVWDSVVPSHMNSPLEGAPKPRSNGLDLFDEDTQEPSGSGSLSNVGESSFGEPEPPQK
KRLRKQTEFDMLDEDDDGAVGIPTKAEPLKKASHIHKKPKDDVYEEFGSGMKLGRPKMQD
AFQPGCTPFQSGKRRFLCYNMLGVITTVETDEYSHIEVDFHDTDKGLRVPSMTDHFGFTM
ASLNENGSVFANPCKGENNMSTLMYRPFSSWANNSEWSMRFEGEEVKAVALGTGWVAAVT
SLNYLRIFTEGGLQKHVVSLDGPVVTASGFKDELAVVTHSSCLPSNDQMLEFRVFNFAKE
AQAIKGRLPLTPGSCLTWLGYSEEGHLSSYDSKGVLRVFTSQFGGSWLPLFSASKDKPED
NYWVVGLNDSKLFCILCKNPLTYPLVTPKPFLTLLNLSFPLASSDLGANDLENEFMLSNL
SLSQIQRKIDEMATSRQNIMSLEDKAFDIETSLDRCILKLIAACCNGDKFERAAELVKLL
SLDKSVQGAIRIATVLKLPVLADRFNCILEERMQNETTGTTPYTKPSFDGFNFKAPDIMP
VADNRRMEFENALPTPKLPSPQFFKQEKAETSRSTVGKERMETNGSPSVEKIKITDVKVQ
GETNPPKKLMTIPEKPRLFGSANEVTCKGNKGEEISPSESHRPTNPFAKSQNTQVKTSSL
LDSIKKMKDGGKS
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctcgatctgtaaagcttaaagaagcacatcagagtaatggatctaaatccagt
tgttctattatctgggatcttgaatctcaacatctcgttacttcttccacttctgatact
aaaatctctatacatgatgcacttttacctgcaaaacctccaaaacttgtctctcatcat
aaggaaggtgttacagctttagcacttaatcctaattcttcatgtcttgcttctggttca
ctcgatcgttctgtctcactctataattttccaggtggaaaatttcaaaccaatataacc
aggttcacgttgccgatacgttgtcttgcttttagtaagtcaggtagtttgttggctgct
gccggtgatgacgagggtattaaattgataaacacaattgataacacaattgatagggtt
ctgaaagaacacaaaggacctgtaactggattagcttttgatccaactggtgagtacttg
gcatctgtagattcaattggtactgtgatattttgggaactgtccactaggacaccaata
aatattcttgaaagggttgctcctcactatggcacagacacgtctgtcccgaatgtattg
tgctggagtccatctggggatgtcttagctgtcccgggtttgaaaaacgatgttgtcatg
tatgataaagatacagcagagaaagttggttcactcaaaggtgaccattcagaatctgtt
tgtttcatgtcttggtcacctaatggaaaatacatggctacatctagcttagataagcag
attttggtgtgggatgttgtcaagaagcaggatataaatcgccaaaagtttgaagacata
atctgttctatggcttggaagccaactgggaatgctttagctgtaatcgatgttatgggg
aagtatggggtgtgggattccgttgttccttcacatatgaattctcctctagaaggtgct
ccaaaaccaagaagtaatgggttggatttatttgatgaagatactcaagaacctagtggt
tctggtagtttgagtaatgttggtgaaagtagctttggcgagcctgagccacctcagaaa
aaaagacttaggaaacagactgaatttgatatgttagatgaagatgatgatggtgcagta
ggcattcctaccaaggctgaacctctcaaaaaagcttctcatattcacaagaaacctaaa
gatgacgtatatgaggaatttggtagcggaatgaagcttggaagaccaaaaatgcaggat
gcttttcagccaggctgtacaccgtttcagagtgggaaacgacgtttcctttgttacaac
atgcttggagtcattactacggtggagactgatgaatattcccacatagaggttgacttc
catgacactgataaaggccttcgagtaccctcaatgactgatcattttggttttacgatg
gcttcacttaatgagaatggaagtgtatttgcaaatccatgcaagggcgagaataatatg
agtactcttatgtatcgcccattcagtagctgggctaacaacagcgagtggtcaatgcgt
tttgagggagaagaagttaaggctgtggctcttggtactggttgggttgctgctgttacc
agtttaaattatctacgcatattcactgaaggtggactgcagaagcatgttgtctctctg
gatgggcctgtggtgacggcatctggcttcaaggatgagctggctgttgtgactcattct
tcttgtcttccctctaatgatcagatgttggagttcagagtcttcaactttgcgaaagaa
gcccaagccatcaaaggtcgtcttccattaacacctggttcatgtttaacatggctaggt
tatagtgaagaaggccacctcagttcttatgattctaagggtgtattgagagtgttcact
agccaattcggaggaagttggttacctctcttcagcgctagcaaggataagcccgaggat
aactactgggtggttgggctgaatgatagcaaattgttctgtattctctgcaaaaatcct
ctgacatatcctctggtgacacccaagccatttcttacactgctgaatctttcatttcct
ctagcgtcttccgatctgggagctaacgatcttgaaaatgaatttatgttgagcaaccta
tctctctcacagattcagagaaagattgatgaaatggccacttctcgtcaaaatatcatg
tcactagaagacaaagctttcgatattgagacatctcttgacagatgcatcttgaagctt
attgcggcatgctgtaatggtgataagtttgagagagctgcggagcttgtgaaactttta
tctttggataaatcagtgcaaggtgcgataaggattgctactgtcctgaagcttcctgtg
ttggctgatcgctttaattgcatccttgaggaaagaatgcaaaatgaaactactgggaca
actccatatacaaaaccatcctttgatggttttaattttaaagctcccgatatcatgcct
gttgctgataacagaaggatggaatttgaaaatgcgttgcccacaccaaagcttccttca
cctcagtttttcaagcaagaaaaagcagaaacaagtaggtctactgtgggaaaagagaga
atggaaaccaatggaagtcctagtgttgagaaaataaagataactgatgtcaaggttcag
ggtgaaactaatcccccgaaaaagttgatgaccattccagagaagcctagattatttggt
tctgctaatgaagtcacatgcaagggaaacaaaggtgaagagataagtccatctgagtct
catcgacctacaaatccatttgcaaagtcacagaatacccaggtaaagacatcatctctg
ttggattctatcaagaagatgaaagatggaggtaaaagctag
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