Papaver somniferum (opium poppy): 113281946
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Entry
113281946 CDS
T05758
Name
(RefSeq) ribosomal RNA small subunit methyltransferase nep-1-like
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
113281946
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psom03009
]
113281946
Enzymes [BR:
psom01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
113281946
Ribosome biogenesis [BR:
psom03009
]
Eukaryotic type
90S particles
Other 90S particles
113281946
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMG1
Vir1p
CDC45
Motif
Other DBs
NCBI-GeneID:
113281946
NCBI-ProteinID:
XP_026386646
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All DBs
Position
5:75415507..75419864
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AA seq
286 aa
AA seq
DB search
MVRPYAVKGGVKRKKREEVYDDEDIEATISTLENNTYKEEEKEKEAEKEEEIDRDETGTE
SELAGIPIAPSSSVKKSKSGIVFVLERASLEVGKVGKTYQLLNSDEHSNFLKKHGKNPAD
YRPDIAHQALLAILDSPLNKAGRLQAVYVKTEKGVLFEVKPHCRMPRTFKRFCGIMLQLL
QKLNITATGKREKLLRVIANPVTRHLPFNSRKIGLSHSSSKLVQLRDYVNAASDDMNLVF
VVGAMSHGKINNDYTDDFISVSGYPLSAACCIGRICNALELKWKIL
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggtaagaccttacgcagtgaaaggtggagttaagaggaagaagagggaagaagtatac
gatgatgaagatattgaagcaacaatctcaactttagaaaataatacttacaaggaagaa
gaaaaagaaaaagaagcagaaaaagaagaagaaatagatagagatgaaacaggaacggag
agtgaacttgctggtattccaattgcaccttcttcttctgttaaaaaatcaaagtctggg
attgttttcgttcttgaaagagcttctttggaagttggcaaagttggaaagacctaccag
ctcttaaattctgatgaacactctaattttctgaagaagcatggtaaaaatccagctgat
tacaggcctgacatcgcccatcaggcactacttgcaatattagatagtccacttaacaag
gctgggaggttacaagctgtttatgtgaaaacggagaaaggagtgctttttgaagtcaaa
cctcattgtcgtatgccaagaactttcaagaggttttgtggtatcatgttgcagctacta
caaaaattgaatataactgccactggaaagcgggaaaagcttttgcgtgtgattgcgaat
ccagtaactcggcatttaccgtttaactctcgtaaaatcggtctctcgcatagctcatca
aagttggttcaattaagggattacgttaatgctgctagtgatgatatgaaccttgtgttc
gtggtcggggcaatgtctcatgggaaaatcaataatgactataccgatgattttatatca
gtttccggatatcctttgagtgctgcgtgttgcattggtcggatctgcaacgccttggag
ctgaagtggaagattttgtaa
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