Papaver somniferum (opium poppy): 113282021
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Entry
113282021 CDS
T05758
Name
(RefSeq) transcription initiation factor IIE subunit alpha-like
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
113282021
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psom03021
]
113282021
Transcription machinery [BR:
psom03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
113282021
Prokaryotic type
Archaeal type
TFE
113282021
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Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIE_alpha
OB_LytA
Zn_ribbon_SprT
HVO_A0261_N
DUF7836
Motif
Other DBs
NCBI-GeneID:
113282021
NCBI-ProteinID:
XP_026386722
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All DBs
Position
5:80931842..80937068
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AA seq
465 aa
AA seq
DB search
MSVEPFNRLVKLAARAFYDDIPLKGENQPKNGRSDNRGMAVVILDALTRRQWVREEDLAK
DLKLHTKQLRRTLRFFEEEKLVTRDHRKETAKGAQRFSAAVANTTDGHGKEGEEKIKLHT
HSYCCLDYSQIYDVVRYRHHRMKKKLKDELDCRNTVQEYVCPGCKRRYNALDALQLVSLT
GEGFHCENCNGELVAESDKLAADEMGDGDDNARRRRREKLRDMLQKMEGQLKPLLEQLNR
VKDLPCPEFGTLQAWEARASAAHRAAHGDANGNDPSKSSQQYGGTPLPFMGDAKVEVDFG
AAVKEEDVKPDAGAMKVLPPWMIMQGMNLTKEQRGEATTEELKVDGKPTSVDLSDDKKPK
VEKEDEKDTIQSEYYKAYYAAILKRQKEQDEAAKMNQEELTSTENGFSDMPSDRQVGMKA
KREDDDDVEWEDAPTTGTATGTYKLNDLNASVEESEEDEIDWEDG
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgagtgttgaaccgttcaacaggttggtgaaattagcagcccgagctttttatgatgac
attccattgaaaggcgagaaccagcccaagaacggtagaagtgataaccgtggaatggcg
gttgtgattctagatgcccttacaaggcgacaatgggtcagggaagaggacttggccaag
gatttgaagctgcacacaaagcaactacgccggactctacgttttttcgaggaagagaag
ctggtcacaagggaccatcgaaaagagacggcaaaaggtgcacagagatttagtgccgca
gtagccaacaccactgatggtcatgggaaagagggagaggaaaagataaaactgcatacc
cattcttactgctgcttggattattcacagatttacgatgttgtaagatatcgacatcac
cgcatgaagaaaaaactgaaggatgaacttgattgtaggaatacagttcaggaatatgta
tgccctggctgcaagagaaggtataatgcactggatgcacttcaactggtttccctaacg
ggcgagggttttcactgtgaaaactgcaatggtgaacttgttgctgagagtgacaaatta
gctgctgatgaaatgggtgatggagatgataatgcaaggaggaggagacgggaaaagttg
agggacatgcttcaaaagatggagggacagctgaaaccattgctggagcagctcaacaga
gtgaaggatttaccttgtcctgaatttggtactctccaagcatgggaagcccgagccagt
gctgctcaccgtgcagcacatggtgatgccaatgggaatgatccatctaagtcttctcaa
caatatggtggaacacctttgccatttatgggcgacgcaaaggttgaagttgattttggt
gcggcagtgaaagaagaggatgtcaaacctgatgctggagcgatgaaagtcttgcctccc
tggatgatcatgcagggcatgaatctcacaaaggagcaacgtggagaagccactactgag
gagttaaaggtcgatgggaagccaacatctgtagatttgtctgatgataaaaagccaaaa
gtcgaaaaggaggatgaaaaagatacaatacagagcgagtactataaagcttattatgca
gcgatattgaaaaggcaaaaagaacaagatgaagctgcgaagatgaatcaagaagagcta
actagtactgaaaatggtttctcggatatgccttctgatcgccaggtgggcatgaaagct
aaacgtgaggacgatgatgacgttgaatgggaagatgccccaacaacaggaacagcaact
ggaacttataagttaaacgatttgaatgcttctgtagaagaatcggaggaggatgagata
gattgggaagacggttaa
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