KEGG   Papaver somniferum (opium poppy): 113282105
Entry
113282105         CDS       T05758                                 
Name
(RefSeq) protein RAE1-like
  KO
K14298  mRNA export factor
Organism
psom  Papaver somniferum (opium poppy)
Pathway
psom03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:psom00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    113282105
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psom03019]
    113282105
   03036 Chromosome and associated proteins [BR:psom03036]
    113282105
Messenger RNA biogenesis [BR:psom03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     113282105
Chromosome and associated proteins [BR:psom03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    113282105
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_WDR3_1st WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR5 WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_RIG_2nd WD40_Gbeta Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 EIF3I Beta-prop_HPS5 Beta-prop_TEP1_C Beta-prop_ACSF4 WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_Aladin Beta-prop_SPT8 Beta-prop_IFT140_1st Beta-prop_WDR75_1st Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_Nup120_160 Beta-prop_WDR75_2nd Beta-prop_WDR41 Beta-prop_NUP159_NUP214
Other DBs
NCBI-GeneID: 113282105
NCBI-ProteinID: XP_026386829
LinkDB
Position
1:29482198..29486043
AA seq 346 aa
MSGIGGLTNQNPNKSYEVVQPPTDSISSLCFSPKGNYLVATSWDNQVRCWEIQRSGANTG
SVAKAAISHDQPVLCSAWKDDGMTVFSGGCDKQVKMWPLMSNGQPVTVAMHDAPVKEVAW
IPEMNLLATGSWDKTLKYWDLRQQTPVHTQQLPERCYSLSVKYPLMVVGTADRNLIVFNL
NKPQEEFKRIQSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDETLQAKNFTFKCHRE
GQEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKALSRCNAPIPCSAFNSDGSI
YAYAVCYDWSKGAENHNPATAKSTIFLHLPQESEVKGKPRVGTGRK
NT seq 1041 nt   +upstreamnt  +downstreamnt
atgtctggcatcggtggacttaccaatcaaaaccctaataaatcatatgaggttgttcaa
ccgcctactgattctatatccagtctatgttttagccctaaaggcaactatcttgttgct
acttcttgggataatcaggttagatgttgggaaatacaaagatcaggagctaatacagga
agtgtggcaaaagctgcaattagtcatgaccaaccggttttgtgctcggcatggaaagat
gatgggatgactgttttctcgggagggtgtgataaacaagtaaagatgtggccgttgatg
tctaatggtcaacctgtgactgttgctatgcatgatgcacctgttaaagaagttgcttgg
ataccagagatgaatcttttggccacaggaagctgggataagactctcaagtactgggac
cttaggcagcaaacaccggtccatacacaacagcttccagaacgttgttactcactctct
gtcaaatatcctctgatggttgttggaacagcagatagaaatctgattgtttttaacctg
aacaaacctcaggaggagtttaagagaattcaatcacccttgaagtatcaaactagatgt
gttgctgcattcccagatcagcaaggttttcttgttggctcgattgagggcagagttggt
gtccatcatttggatgagactttgcaagcgaaaaacttcaccttcaaatgccacagggag
ggacaggagatatactctgtcaactcgttaaattttcatcctgttcatcacacatttgca
actgctggatcagatggtgccttcaatttttgggacaaggatagcaaacagagactcaag
gccttgtctaggtgcaatgctcctattccttgcagtgcattcaacagtgatggttcaata
tatgcatatgcggtgtgttatgactggagcaagggtgcagaaaatcacaatccagctact
gcaaagtcaaccattttcctccacctgccacaggaatccgaggttaaagggaagccacga
gttgggactggtagaaagtga

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