Papaver somniferum (opium poppy): 113282222
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Entry
113282222 CDS
T05758
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
113282222
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psom03021
]
113282222
Transcription machinery [BR:
psom03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
113282222
Prokaryotic type
Archaeal type
TFB
113282222
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
DUF7573
zf_Tbcl_2
TPR_NPHP3
RB_B
Zn_ribbon_8
Motif
Other DBs
NCBI-GeneID:
113282222
NCBI-ProteinID:
XP_026386984
LinkDB
All DBs
Position
1:30341929..30345429
Genome browser
AA seq
312 aa
AA seq
DB search
MADAYCSDCKRSTEVVFDHSAGDTVCSECGLVLEAHSIDETSEWRTFANESGDNDPVRVG
GPSNPLLTDGGLSTVISKPNGASGDFLSSSLGRWQNRGSNPDRSLIQAFKTIATMSDRLG
LVATIKDRANEIYKKVEDQKSIRGRNQDAILAACLYIACRQEDKPRTVKEICSVANGATK
KEIGRAKEYIVKQMEIELGQSMEMGTIHAGDFLRRFCSHLGMTNQAVKAAQEAVQKSEEL
DIRRSPISVAAAVIYMITQLSEEKKLLRDISIATGVAEGTIRNSYKDLYPYAVRLIPTWY
AKEEELRNLCSP
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgcttattgctcagactgtaagagaagcacagaggtagtgtttgaccactct
gctggggacacagtttgttcagaatgtgggcttgtcttggaagctcactccattgatgag
acatctgaatggaggacctttgcaaacgagtctggtgataatgatcccgtccgtgttggt
ggtccatcaaaccctctcctcactgacggtggtctttccactgtgatttcaaagccaaat
ggtgcttctggtgattttctgtcatcctctctagggcgttggcagaatcggggttcaaat
cctgaccgatcgcttatccaagccttcaaaaccattgctaccatgtctgacagattgggc
cttgtcgcaaccataaaggatagagcgaatgaaatatataagaaggtggaagatcagaag
tccattaggggaagaaatcaagatgcaattctggctgcctgcttgtatatagcttgtcgt
caggaggataaacctcgcacggtgaaggaaatatgctctgttgccaatggagcaacaaag
aaggaaatagggcgcgcgaaagagtacatcgtgaaacaaatggagatagagttgggtcaa
tcaatggaaatgggaaccatacatgctggagactttttgaggcgtttctgttcccatctg
ggtatgaccaaccaagccgttaaagctgcacaagaagcagttcaaaagtcagaagagctt
gacataaggaggagccctatatcagtagcagctgctgtcatttacatgataactcagctg
tcggaggagaagaagctactccgagatatatccattgcaactggagttgctgagggaacc
attaggaactcatacaaggatctgtatccttacgctgttaggttaatacctacctggtat
gcaaaagaggaggagctgaggaacttatgcagcccttga
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