Papaver somniferum (opium poppy): 113282229
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Entry
113282229 CDS
T05758
Name
(RefSeq) transcription initiation factor IIB-2-like
KO
K03124
transcription initiation factor TFIIB
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
113282229
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psom03021
]
113282229
Transcription machinery [BR:
psom03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
113282229
Prokaryotic type
Archaeal type
TFB
113282229
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
WHD_GDS1
DUF7573
DUF4739
Zn_ribbon_8
Motif
Other DBs
NCBI-GeneID:
113282229
NCBI-ProteinID:
XP_026386995
LinkDB
All DBs
Position
1:30345687..30350162
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AA seq
256 aa
AA seq
DB search
MDAFCSDCKRNTEVVFDHSAGDTVCSECGLVLEAHSIDETSEWRTFANESGDNDPNRVGG
PSNPLLTDGGLSTVISKPNGASGDFLSSSLGRWQNRGSNPDRTLMQAFKTIATILGLVAT
IKDRANEIYKKVEDQKSIRGRNQDAILAACLYIACRQEDKPRTVKEICSVANGATKKEIG
RAKECIVKQMESDPDLSVPFSVNPVHAVDFLRRFCSHLGMTNQAVKAAQEAVQKSEELDI
RRSPISVAAAVIYMIT
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atggatgcattttgctcagactgtaaaagaaacacagaggtagtgtttgaccactctgcc
ggggacacagtttgttccgaatgcgggcttgtcttggaagctcactccatcgatgagaca
tctgaatggaggacctttgcaaatgagtctggtgataatgatcccaatcgtgttggtggt
ccatcaaaccctctcctcactgatggtggtctttccactgtaatttcaaaaccaaatggt
gcttctggtgattttctgtcatcctctctaggacgttggcagaatcgaggttcaaatcct
gatcggacgctcatgcaagccttcaaaaccatcgctaccatattgggccttgttgcaacc
ataaaggacagagcgaatgagatatataagaaggtggaagatcagaagtccattagagga
agaaatcaagatgcaattttggctgcatgcctgtatatagcttgtcgtcaagaggacaaa
cctcgcacggtgaaggaaatttgctctgttgccaatggagcaacaaagaaggaaataggg
cgcgcgaaagagtgcatcgtgaaacagatggagtcagacccggacctgtcggttccgttt
tctgtaaaccccgtacatgctgtagactttttgaggcgtttctgttcccatcttggcatg
accaaccaagccgttaaagctgcccaagaagcagttcaaaagtcagaagagcttgacata
aggaggagccctatttcagtagctgctgctgtcatttacatgataacctag
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