Papaver somniferum (opium poppy): 113282470
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Entry
113282470 CDS
T05758
Name
(RefSeq) protein ANTHESIS POMOTING FACTOR 1
KO
K14962
COMPASS component SWD2
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113282470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psom03019
]
113282470
03036 Chromosome and associated proteins [BR:
psom03036
]
113282470
Messenger RNA biogenesis [BR:
psom03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
113282470
Chromosome and associated proteins [BR:
psom03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
113282470
COMPASS/SET1 complex (yeast)
113282470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_CAF1B_HIR1
EIF3I
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_SPT8
NBCH_WD40
WD40_MABP1-WDR62_1st
WD40_RFWD3
Beta-prop_SCAP
WD_LRWD1
Beta-prop_NWD2_C
Methyltransf_13
Motif
Other DBs
NCBI-GeneID:
113282470
NCBI-ProteinID:
XP_026387266
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All DBs
Position
5:complement(115395733..115401637)
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AA seq
329 aa
AA seq
DB search
MTALTELDDQIVRNMSIAAVFSDFGGKINSVDFHRTEDLLVTASEDDSVRFYNIATATLL
KTTHHKKHGADRICFTHHPSSVICSSTHNLDESLRYLSMFDNRCLRYFKGHKEKVVSLCM
SPINDSFMSGSLDHSVRIWDLRVNSCQGILRLRGRPTVAYDQQGLVFAVAMEGGAIKLFD
SRSYDKGPFDTFFVGGDTAEVSDIKFSNDGKSMLLTTTHNNIYVLDAYGGEKRCGFSLEP
SPNVAIEATFTPDGQYVVSGSGDGTLHAWSINMRNEVACWNSHIGVATCLKWAPRRAMFV
AASSVLTFWIPDNTKSSLNSGNTGPDAGI
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgacggcattaacagagctcgatgatcagattgttcgtaatatgtccattgcagctgtt
ttctcagacttcggcggtaagatcaattcggttgattttcatcgtaccgaggatctattg
gttactgctagcgaggatgactccgtgcggttttacaacattgcaactgctacattgttg
aagactacacaccataagaagcacggtgctgacaggatatgttttacacatcatccaagc
tctgttatctgctcttcgacgcacaatttggatgaatcgctgcgctatctttcaatgttt
gacaatcgatgcctccgctacttcaaagggcacaaggagaaagttgtttctctctgcatg
tctccaataaacgacagcttcatgtctggctcactagatcacagtgttaggatttgggat
ctccgtgtaaactcttgccagggaatcctacgcttacgtggtaggcctactgtggcatac
gatcaacaaggtcttgtgtttgcagttgcaatggaagggggtgctatcaaattgtttgat
tcacgttcctatgataagggtcctttcgacactttctttgtgggcggtgatacagctgag
gtatctgatatcaagtttagcaatgatggcaagtctatgcttttgacaacgactcacaac
aacatttatgttcttgatgcatatggtggagagaagcgatgcggcttcagtttggaacca
tctcccaatgtagccatagaggcaactttcacacctgatgggcaatatgttgtatccggc
tctggagatggtactttacatgcatggagcatcaacatgcgaaatgaggtggcatgctgg
aatagccacataggtgtagctacttgcttgaagtgggcgcctcgtagagccatgtttgta
gctgcttcctcggttctaacgttttggattcctgacaacacaaagtcttctctaaactcg
ggcaacacaggacctgatgcgggaatatga
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integrated database retrieval system
