Papaver somniferum (opium poppy): 113282480
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Entry
113282480 CDS
T05758
Name
(RefSeq) polygalacturonase At1g48100-like isoform X1
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom00040
Pentose and glucuronate interconversions
psom01100
Metabolic pathways
Module
psom_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
113282480
Enzymes [BR:
psom01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
113282480
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
SARAF
YxzE
Motif
Other DBs
NCBI-GeneID:
113282480
NCBI-ProteinID:
XP_026387279
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Position
5:116228902..116231768
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AA seq
484 aa
AA seq
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MMKKTRNSSQSVCLLTVFLVIIFTISFSTTTSSVEARKNNHHRNTKNRHGHQHSHNKKRG
HSPAPSSSPTPTFKPTPPNPYTKKSNIFDVLSFGAKGDGIADDSKALQGAWKAACKVEGG
IVEIPSEFRFLIRQISLQGPCKPHLVLQIDGIMLAPPNIGSWSKSDLYQWINIKWVKNFT
IQGGGVVDGQGFAWWKPNEVSYIQQKTSKHMPDMKPTALRFYESSSVTVRDIRIINSPLC
HLKFDNSSFINVNNVTIISPENSPNTDGIHLQNSKNVEIQHSNIGCGDDCVSIQTGCSNV
HVHHINCGPGHGISLGSFGKDKTIACVKDIVIDNILMQNTMYGARIKSWQGGMGLVKNVT
FSNIQVSNVSTPIMIDQYYCDKQKCKNQTEAVAITGVTFNQIVGTYASQPLHLACSDGVP
CRNVDLIDIQLKPSLVSGGFHQALCWNSHGKSQAPLVPSSIDYCLRSGVGSLKRPSKSHS
EQFC
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaaaaaactagaaattcatctcaatcagtctgtcttcttactgttttcttggtt
ataatcttcaccatttcgttttctacaactacttcttctgttgaagcaagaaagaataat
caccatagaaataccaaaaatcgtcatgggcatcaacatagtcataataagaagagagga
cattctcctgcaccatcatcttctccaacacctacatttaagcctacaccaccaaaccct
tacaccaagaaatcaaacattttcgatgttttgtcttttggtgctaaaggtgatgggatt
gcagatgattccaaggcattacaaggtgcatggaaagctgcatgtaaagtagaaggagga
atagtggaaattccgtcagaattcaggtttctcataagacaaatttcacttcaaggtcca
tgcaaacctcaccttgttctccagattgatgggattatgttagctccaccaaatataggt
tcatggtcaaagtccgatctatatcaatggataaacatcaaatgggttaaaaatttcaca
attcaagggggtggagttgttgatggccaaggttttgcttggtggaaacctaatgaagtc
agctacattcagcagaagacatcgaaacacatgccagatatgaaaccaactgctttgaga
ttctatgagagctccagtgttacggttcgagatataagaatcattaatagtccattgtgc
cacttgaaattcgataattcaagctttataaatgtcaataatgttacgattatttcgcct
gagaatagcccaaacacagatggaattcatcttcaaaacagcaaaaatgtagaaatccaa
cactccaacattggatgtggagatgactgtgtatcaatacaaacagggtgttcgaatgta
catgttcatcacataaactgtggacctggacatggaattagtcttggtagttttgggaag
gacaagactatcgcgtgtgttaaagacatcgtcatcgacaatatactgatgcaaaatacc
atgtatggagcaaggattaaatcatggcagggaggtatgggattagtaaagaatgtaacg
ttttcgaacattcaagtctctaacgttagcacaccgatcatgatagaccaatactactgc
gacaaacagaagtgtaaaaatcaaacggaagccgtggcaataacgggtgttacatttaat
cagatagtcggaacatatgcaagccaaccattacatctcgcgtgtagtgatggtgtcccg
tgtagaaacgtcgatctcattgacatccaactgaaaccatcattagtttctggaggtttt
catcaagctctatgttggaattcacatggcaaatcacaagctcctttagttccttcgagc
atcgattattgtctaagaagtggagttggctctttgaaaagaccatcaaaatcacatagt
gaacaattttgttag
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