Papaver somniferum (opium poppy): 113282490
Help
Entry
113282490 CDS
T05758
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
113282490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psom03019
]
113282490
03009 Ribosome biogenesis [BR:
psom03009
]
113282490
04131 Membrane trafficking [BR:
psom04131
]
113282490
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psom04147
]
113282490
Messenger RNA biogenesis [BR:
psom03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
113282490
Ribosome biogenesis [BR:
psom03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
113282490
Membrane trafficking [BR:
psom04131
]
SNARE
SNARE associated proteins
Others
113282490
Autophagy
Aggrephagy
Other aggrephagy associated proteins
113282490
Exosome [BR:
psom04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
113282490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_2
CDC48_2
AAA_5
AAA_33
AAA_22
AAA_14
TIP49
NPHP3_N
RNA_helicase
AAA_17
Mg_chelatase
nSTAND3
AAA_28
Parvo_NS1
ATPase_2
AAA_18
IstB_IS21
Vps4_C
ABC_tran
Viral_helicase1
AAA_7
AAA_lid_PRS2_C
NB-ARC
AAA_24
TsaE
Zeta_toxin
ResIII
NACHT
DUF815
Sigma54_activ_2
Zot
Molydop_binding
Motif
Other DBs
NCBI-GeneID:
113282490
NCBI-ProteinID:
XP_026387291
LinkDB
All DBs
Position
5:116942142..116946297
Genome browser
AA seq
821 aa
AA seq
DB search
MADPTPSLPDLNKPSSSSDPVSHKKDFSTAILERKKSPNRLVVDEAINDDNSVVAMNPAT
MEKLQLFRGDTVLIKGKKRRDTVCIVLVDEQCEEPKIRMNKVVRANLRVRLGDVVSVHQC
PDVKYGKRVHILPIDDTIEGVTGNLFDAYLKPYFLESYRPVRKGDFFLVRGGMRSVEFKV
IETEPGEYCIVAPDTEIFCEGEPIKREDEEKLNEVGYDDVGGVRKQMAQIRELVELPLRH
PQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNL
RKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGA
TNRPNSIDPALRRFGRFDREIDVGVPDEVGRLEVLRIHTKNMKLAEDVDLEKVSKDTHGY
VGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMSVTNEHFQTALGTSNPSALRE
TVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTL
LAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQR
GSSQGDAGGAGDRVLNQLLTEMDGMTAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIP
LPDEASRLQIFKACLRKSPVARDVDISALARYTQGFSGADITEICQRACKYAIRENIEKD
IERERKRSENPEAMEEDEIDEVPEIKPAHFEESMKFARRSVSDADIRKYQMFAQTLQQSR
GFGSEFRFSDRPDNTSAAGTGPSDPFAIAAATNVDDDDLYS
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atggctgatccgactccatcactaccagatctcaacaaaccttcttcatcttctgatccg
gtaagccataagaaagatttttcaactgctattttagaacgtaagaaatctccaaatcga
cttgttgttgatgaggcaataaatgatgataactctgtggtggcgatgaaccctgcaaca
atggaaaaacttcagctttttcgtggagacacagttttgattaagggaaaaaaacgtaga
gatacagtatgcattgttcttgttgatgagcagtgtgaggaaccaaaaatcagaatgaat
aaggttgtgcgtgctaatcttagggtgcggcttggggatgttgtgtctgttcatcagtgt
ccagatgttaagtatggaaagcgtgttcacatccttcccattgatgatacaatcgagggt
gtgactggcaacttatttgatgcatacctcaagccttacttcttagaatcttatcgacct
gtacgaaagggtgactttttcttagttagagggggcatgcgaagtgtggaatttaaagta
attgagacagaacctggtgagtactgcattgttgcaccagatacagaaattttctgtgaa
ggcgaacctattaaacgagaagatgaggagaaattaaacgaagttggctatgacgatgtt
gggggtgtccgaaagcaaatggctcaaattcgggagcttgttgaactacctttaaggcac
ccacaacttttcaagtccatcggtgtgaaacctccaaaaggtatactgttgtatggtcca
ccggggtctgggaaaaccttgattgctagggctgtggcaaatgaaactggtgcgtttttc
tttttgataaatggacctgaaatcatgtcaaagttggctggggagagtgaatcaaatctg
aggaaggctttcgaggaagctgaaaagaatgccccctcgatcatcttcattgatgaaatt
gatagcattgctccaaagagagaaaagacacatggtgaagtggagaggcgtattgtgtct
cagctactgactttgatggatggtcttaaatctcgagctcatgtgatcgtgatgggagct
accaataggccaaatagcattgacccagctctgaggcgatttggcaggtttgatcgggag
attgacgttggtgttccagatgaagttggaagattggaagttctccggatacatacaaag
aatatgaagcttgcagaagatgttgatcttgaaaaagtttcaaaggacacccatgggtat
gtcggtgctgatcttgctgcgctttgcactgaagctgctctacagtgcatcagagagaag
atggatgtcattgatttggaagatgagaccattgatgctgagatccttaattccatgtct
gttacgaatgaacacttccaaactgcgctgggcacgtcgaatccgtcggccctacgtgaa
acggttgtggaagtgcctaacgtttcatgggaggatatcggtgggttggaaaatgttaaa
agagaacttcaggagactgtccaatacccagtggagcatcctgagaagtttgagaaattt
ggaatgtctccatctaaaggtgtcctattctatggccctcctggatgtggtaaaacactt
ctggccaaggcaatcgcaaatgagtgccaagctaacttcataagtattaaaggacctgag
ctgcttacaatgtggtttggagagagtgaggcaaatgtgcgagagatatttgataaagca
cgggggtctgctccatgtgtacttttctttgacgaactcgattccatagcaactcagcgt
gggagttcacaaggagatgctggtggtgctggagatagggttttgaaccaacttttgaca
gaaatggatggcatgacggcaaagaaaacagttttcatcattggggctacaaacagacca
gatattattgacccagcgctgctcaggcctggtcgactagaccagttgatttacattcct
cttccagatgaagcttcccggcttcagatcttcaaagcttgcttgcgaaaatcacccgtc
gctagggatgttgatatttcagctttagcacgttatacccaaggttttagtggtgctgat
atcactgaaatctgtcaacgggcctgcaaatatgcaatcagagaaaatattgaaaaggac
attgagagggagaggaagagaagtgaaaatccagaagcaatggaagaagatgagattgat
gaagttccggagatcaaaccagcacactttgaagaatccatgaagtttgcgcgccgtagt
gtgagtgacgccgacattcggaagtatcagatgtttgcacaaacacttcaacaatcacgt
ggttttgggtctgaattccgattctctgatcgccctgataatacctcagcagcaggcact
ggaccgtctgatccttttgctatagctgcagccaccaatgtggatgatgatgacctttat
agttag
DBGET
integrated database retrieval system