KEGG   Papaver somniferum (opium poppy): 113282490
Entry
113282490         CDS       T05758                                 
Name
(RefSeq) cell division cycle protein 48 homolog
  KO
K13525  transitional endoplasmic reticulum ATPase
Organism
psom  Papaver somniferum (opium poppy)
Pathway
psom04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:psom00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    113282490
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psom03019]
    113282490
   03009 Ribosome biogenesis [BR:psom03009]
    113282490
   04131 Membrane trafficking [BR:psom04131]
    113282490
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:psom04147]
    113282490
Messenger RNA biogenesis [BR:psom03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     113282490
Ribosome biogenesis [BR:psom03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    113282490
Membrane trafficking [BR:psom04131]
 SNARE
  SNARE associated proteins
   Others
    113282490
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    113282490
Exosome [BR:psom04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   113282490
SSDB
Motif
Pfam: AAA AAA_lid_3 CDC48_N RuvB_N AAA_16 AAA_2 CDC48_2 AAA_5 AAA_33 AAA_22 AAA_14 TIP49 NPHP3_N RNA_helicase AAA_17 Mg_chelatase nSTAND3 AAA_28 Parvo_NS1 ATPase_2 AAA_18 IstB_IS21 Vps4_C ABC_tran Viral_helicase1 AAA_7 AAA_lid_PRS2_C NB-ARC AAA_24 TsaE Zeta_toxin ResIII NACHT DUF815 Sigma54_activ_2 Zot Molydop_binding
Other DBs
NCBI-GeneID: 113282490
NCBI-ProteinID: XP_026387291
LinkDB
Position
5:116942142..116946297
AA seq 821 aa
MADPTPSLPDLNKPSSSSDPVSHKKDFSTAILERKKSPNRLVVDEAINDDNSVVAMNPAT
MEKLQLFRGDTVLIKGKKRRDTVCIVLVDEQCEEPKIRMNKVVRANLRVRLGDVVSVHQC
PDVKYGKRVHILPIDDTIEGVTGNLFDAYLKPYFLESYRPVRKGDFFLVRGGMRSVEFKV
IETEPGEYCIVAPDTEIFCEGEPIKREDEEKLNEVGYDDVGGVRKQMAQIRELVELPLRH
PQLFKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNL
RKAFEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGA
TNRPNSIDPALRRFGRFDREIDVGVPDEVGRLEVLRIHTKNMKLAEDVDLEKVSKDTHGY
VGADLAALCTEAALQCIREKMDVIDLEDETIDAEILNSMSVTNEHFQTALGTSNPSALRE
TVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTL
LAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQR
GSSQGDAGGAGDRVLNQLLTEMDGMTAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIP
LPDEASRLQIFKACLRKSPVARDVDISALARYTQGFSGADITEICQRACKYAIRENIEKD
IERERKRSENPEAMEEDEIDEVPEIKPAHFEESMKFARRSVSDADIRKYQMFAQTLQQSR
GFGSEFRFSDRPDNTSAAGTGPSDPFAIAAATNVDDDDLYS
NT seq 2466 nt   +upstreamnt  +downstreamnt
atggctgatccgactccatcactaccagatctcaacaaaccttcttcatcttctgatccg
gtaagccataagaaagatttttcaactgctattttagaacgtaagaaatctccaaatcga
cttgttgttgatgaggcaataaatgatgataactctgtggtggcgatgaaccctgcaaca
atggaaaaacttcagctttttcgtggagacacagttttgattaagggaaaaaaacgtaga
gatacagtatgcattgttcttgttgatgagcagtgtgaggaaccaaaaatcagaatgaat
aaggttgtgcgtgctaatcttagggtgcggcttggggatgttgtgtctgttcatcagtgt
ccagatgttaagtatggaaagcgtgttcacatccttcccattgatgatacaatcgagggt
gtgactggcaacttatttgatgcatacctcaagccttacttcttagaatcttatcgacct
gtacgaaagggtgactttttcttagttagagggggcatgcgaagtgtggaatttaaagta
attgagacagaacctggtgagtactgcattgttgcaccagatacagaaattttctgtgaa
ggcgaacctattaaacgagaagatgaggagaaattaaacgaagttggctatgacgatgtt
gggggtgtccgaaagcaaatggctcaaattcgggagcttgttgaactacctttaaggcac
ccacaacttttcaagtccatcggtgtgaaacctccaaaaggtatactgttgtatggtcca
ccggggtctgggaaaaccttgattgctagggctgtggcaaatgaaactggtgcgtttttc
tttttgataaatggacctgaaatcatgtcaaagttggctggggagagtgaatcaaatctg
aggaaggctttcgaggaagctgaaaagaatgccccctcgatcatcttcattgatgaaatt
gatagcattgctccaaagagagaaaagacacatggtgaagtggagaggcgtattgtgtct
cagctactgactttgatggatggtcttaaatctcgagctcatgtgatcgtgatgggagct
accaataggccaaatagcattgacccagctctgaggcgatttggcaggtttgatcgggag
attgacgttggtgttccagatgaagttggaagattggaagttctccggatacatacaaag
aatatgaagcttgcagaagatgttgatcttgaaaaagtttcaaaggacacccatgggtat
gtcggtgctgatcttgctgcgctttgcactgaagctgctctacagtgcatcagagagaag
atggatgtcattgatttggaagatgagaccattgatgctgagatccttaattccatgtct
gttacgaatgaacacttccaaactgcgctgggcacgtcgaatccgtcggccctacgtgaa
acggttgtggaagtgcctaacgtttcatgggaggatatcggtgggttggaaaatgttaaa
agagaacttcaggagactgtccaatacccagtggagcatcctgagaagtttgagaaattt
ggaatgtctccatctaaaggtgtcctattctatggccctcctggatgtggtaaaacactt
ctggccaaggcaatcgcaaatgagtgccaagctaacttcataagtattaaaggacctgag
ctgcttacaatgtggtttggagagagtgaggcaaatgtgcgagagatatttgataaagca
cgggggtctgctccatgtgtacttttctttgacgaactcgattccatagcaactcagcgt
gggagttcacaaggagatgctggtggtgctggagatagggttttgaaccaacttttgaca
gaaatggatggcatgacggcaaagaaaacagttttcatcattggggctacaaacagacca
gatattattgacccagcgctgctcaggcctggtcgactagaccagttgatttacattcct
cttccagatgaagcttcccggcttcagatcttcaaagcttgcttgcgaaaatcacccgtc
gctagggatgttgatatttcagctttagcacgttatacccaaggttttagtggtgctgat
atcactgaaatctgtcaacgggcctgcaaatatgcaatcagagaaaatattgaaaaggac
attgagagggagaggaagagaagtgaaaatccagaagcaatggaagaagatgagattgat
gaagttccggagatcaaaccagcacactttgaagaatccatgaagtttgcgcgccgtagt
gtgagtgacgccgacattcggaagtatcagatgtttgcacaaacacttcaacaatcacgt
ggttttgggtctgaattccgattctctgatcgccctgataatacctcagcagcaggcact
ggaccgtctgatccttttgctatagctgcagccaccaatgtggatgatgatgacctttat
agttag

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