Papaver somniferum (opium poppy): 113282539
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Entry
113282539 CDS
T05758
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3-II-like isoform X1
KO
K13148
integrator complex subunit 11 [EC:3.1.27.-]
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psom03041
]
113282539
Spliceosome [BR:
psom03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
113282539
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GFIT
Motif
Pfam:
Beta-Casp
Lactamase_B_6
RMMBL
Lactamase_B
Lactamase_B_2
Lactamase_B_3
Motif
Other DBs
NCBI-GeneID:
113282539
NCBI-ProteinID:
XP_026387348
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Position
5:122086508..122094846
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AA seq
678 aa
AA seq
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MAIDCLVLGAGQEVGKSCVVVTIGEKRIMFDCGMHMGYQDHRRYPEFSLISDSGDFNASL
TCVIITHFHLDHVGALAYFTEVCGYNGPIYMTYPTRALSPLMLEDYRKVMVDRRGEEEQF
TSDHIMDCMKKVTTVDLKQTIQVDKDLQIRAYYAGHVLGAAMFYAKVGDSAFVYTGDYNM
TPDRHLGAAQIDRLQLDLVITESTYATTIRDSKYAREREFLKAVHKCVAGGGKVLIPTFA
LGRAQELCILLDDYWERLNLKIPIYFSAGLTIQANMYYKMLIGWTSQSVKDSYATKNAFD
FKHVCSFERSLINAPGPCVLFATPGMLSGGFSLEVFKLWAPSEKNLITLPGYCVAGTVGH
KLMSGKPGKIFVDKETQIDVKCQIHQLSFSPHTDAKGIMDLVKFLSPKHVILVHGEKPKM
ATLKGRIESELQIPCYYPANNESVHIASTQYVKIDASESFIQNCLKPTHKCLKSFSDSNT
NDTTTVSSPISEMNKESVAEGFLIMEKTKRAKAVHKGELMPTLSLEEHKIQFAYCCSVNA
GTLLLQEQDQHNDELSESLSRGSTISELGNSSNALAQITGSSATKELPLSDQQSQLHLLF
LKLSEELVEEKIQEFPDHLQVESFHVSVCQKNNNCPYKIKDFFDVDSLVSFCCKWSLVDQ
NLAWRVISVIKGLDATTV
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggcaattgattgtctggttttaggtgctggacaagaagtaggaaaaagctgtgttgtg
gtgacaattggagagaaaagaatcatgtttgactgtgggatgcatatgggataccaagat
catcgaagatatcctgaattttctctcatttctgattccggcgactttaatgcctctcta
acttgtgttatcatcacccattttcacttggatcatgttggagctcttgcatatttcact
gaggtttgcggatacaatgggccaatctacatgacttatccgacgagggcattgtctcca
ttgatgttggaggattatcgaaaagtgatggtagatcgaagaggagaggaagaacaattt
acatctgatcatatcatggattgtatgaagaaagttacaactgtggacttgaagcaaact
attcaggtcgacaaagatcttcaaatccgagcatactatgcaggacatgtacttggtgct
gcgatgttctatgcaaaggttggagatagtgcttttgtgtatacaggggattataatatg
acacctgacagacatcttggagctgctcaaatagatcgattacagttagacctcgtcata
acagagtctacatatgcaacaacaatacgagattcaaaatatgctcgtgagagggaattt
cttaaggctgttcataaatgtgtcgcaggtggagggaaggtgttaattccaacatttgct
ttgggacgagcacaggagctttgcatacttctggatgattactgggagcgcttgaatctg
aagattcctatttacttctctgctggtttaactattcaagcaaatatgtattataagatg
cttattgggtggaccagccaaagtgtcaaagactcatatgccacaaaaaatgcgtttgat
ttcaaacacgtttgcagttttgaacgttcgctcataaatgctcctggtccttgtgttctc
tttgcaactcctgggatgctcagtggtggattttcacttgaagttttcaagctgtgggct
ccatcagaaaagaatcttattacacttccagggtattgtgtggctggaactgtaggacat
aagctgatgtcaggcaaaccaggcaaaatattcgtggacaaggaaactcaaatcgacgtc
aagtgccagattcatcagctatcatttagtcctcatacagatgcaaaagggattatggat
cttgtcaaattcctgtctccgaaacacgtgatacttgtccatggagagaaaccaaagatg
gcaacactgaaaggaagaatagaatctgaattgcagattccatgttattatcctgccaat
aatgaatctgttcacatcgcttcaactcagtacgtgaaaatagatgcatcagaatcattt
attcagaattgcttaaagccgacccacaaatgtttaaaaagcttctctgattcaaatacc
aatgacacaaccactgtttcctcaccaatttcagaaatgaataaagaatctgttgcagaa
gggtttctgataatggaaaaaaccaaaagagccaaggcagtacacaaaggtgaactaatg
ccaactttgtcgcttgaagaacacaagattcagtttgcttattgttgctctgtaaatgct
ggtactctgttacttcaagaacaagatcaacataatgatgaattgtcagaatcattatct
aggggatccacaatttctgaattgggtaactcatcaaatgcattagctcaaatcactggt
tcttctgcaacaaaggagcttcctctatctgaccaacaatctcagcttcacctattattt
ttgaaactttctgaggaactcgtagaagagaaaatacaagagtttccggaccatttacaa
gtagaatcatttcatgtctccgtttgccagaaaaacaataattgcccttacaagatcaag
gattttttcgacgttgattcgctagtatctttctgctgcaaatggtcattggttgatcag
aatttggcatggagagtcatttcagtcattaaaggtttggatgcaactacagtttaa
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