Papaver somniferum (opium poppy): 113282549
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Entry
113282549 CDS
T05758
Name
(RefSeq) NF-X1-type zinc finger protein NFXL1-like
KO
K12236
transcriptional repressor NF-X1
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psom03000
]
113282549
04121 Ubiquitin system [BR:
psom04121
]
113282549
Transcription factors [BR:
psom03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
113282549
Ubiquitin system [BR:
psom04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
113282549
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_NFXL1
zf-NF-X1
R3H
Motif
Other DBs
NCBI-GeneID:
113282549
NCBI-ProteinID:
XP_026387368
LinkDB
All DBs
Position
5:122254968..122258960
Genome browser
AA seq
1155 aa
AA seq
DB search
MSFQVRNDNRREGSRIPVRNSNNNRQTWIPRGGAVIGSGGGGGGAGGSGSSAILETPPPP
PSSSYFNNSIPNGGRYGGNFNNNYNGNPTGGGGYGGSGSSYYNVNNSVPSGGGYGGGGGG
NSYHNESRSRGNFTHQHHQRSNVSRPVNNPRKEKVEKPAQVSKSLNSNLPQLVQEIQDKL
TKGTVECMICYDMVRRSAPIWSCSSCYSIFHMNCIKKWARAPTSVDLSAEKNQGLNWRCP
GCQSVQLLTSKEIRYLCFCGKRPDPPSDLYLTPHSCGEHCGKPLEKQLQNGDDEDRCPHA
CVLQCHPGPCPPCKAFAPARKCPCGKKMITTRCSDRKSVLTCGQLCHKVLECGRHHCNKI
CHTGPCESCEVPMDASCFCKKKKEVVLCGEMSVKGELIGGGGVFSCNSICSKTLVCGNHT
CGEVCHPGQCGECELMPGNIKSCPCGKTLLQKERVSCLSPIPTCSNTCDKTLPCQIHRCK
ETCHVGVCSPCVVTVNQKCRCGSSSRFAECYKKEKDTFTCEKSCGRKKNCGRHRCSERCC
PLSNSNTRYSGDWDPHLCSMICGKKLRCGQHSCESLCHSGHCPPCLETIFTDLTCACGKT
SIPPPQPCGTPAPSCQQLCSVPQPCGHASTHGCHFGDCPPCSFPVAKECIGGHVILRNIP
CGSKEIRCNQLCGKTRQCGMHACSRTCHPPPCDTSCTSTSGSRSTCGQVCGAPRRDCKHT
CTSSCHPSSPCPERRCEFPVTITCLCGRISATVPCDAGGNTGGFASDTVFEAQLIHKLPV
PLKPVEANGNKVPLGQRKLVCDDECVKMERQRKLADAFKVPLLNLEALHLGDQSVISEQL
QDLFRREPKWVLSIEERCKFLVLGKGKGNTSNGLRVHVFCAMVKEKRDAVRQIAGRWKLS
VHSAGWEPKRFLIVHVTTKSKAPARILGVKGSSVPLTASNPPAFDPLVDMDQRLVVALLD
LPRESNVNALVLRFGGECELVWLDEFNALAIFSDPGRAATALRRLDHGSAYHGAAVVIAP
TVTNVWGTSKEVGSAGAPKANSWKKAVVQEASWGEDSWGVDQNWINNPADVQNAVWRGME
TPITASINRYDVLDQDSVSKSSAVLSSGGVERRPGNYQIGSSSTSTEPKQEAMAGDKSDK
EVVAEVVDDWEEACE
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgagctttcaagtacgtaatgataatcgaagagagggatcgagaattcctgttcgtaat
agtaataataatcgtcaaacatggattcctagaggtggagctgtaattggtagtggtggc
ggtggtggtggtgcaggaggatctggtagtagtgctatactggaaactccaccgccgcca
ccatcatcatcgtattttaataattcgattccaaatgggggaagatacggtgggaatttt
aataataattataatggcaatccgactggtggaggaggatatggtggtagtgggagttct
tattacaatgttaataactcagttccaagtgggggaggatatggtggtggtgggggtggg
aattcttatcacaatgaaagtcggtctagaggaaatttcactcatcaacatcatcaaaga
agtaatgtgtcaagaccagttaataatcctaggaaagagaaggttgagaaaccagctcag
gtgtcaaaaagtttgaattctaatcttcctcagcttgttcaagaaattcaagacaaactt
actaaagggacagttgagtgtatgatttgttatgatatggttagaaggtctgctccaatt
tggtcttgttctagttgttactccatttttcatatgaattgtattaagaagtgggcgaga
gctcctacttctgttgatttatcagctgagaagaaccaagggttgaattggaggtgcccg
ggttgtcagtctgtacaacttcttacttccaaggaaattcgatatctctgtttctgtgga
aagagaccagaccctccttctgatttgtatctcacaccgcattcatgtggtgaacactgt
ggaaagccgctggagaagcagctgcagaatggggatgatgaagatcgctgtccacatgct
tgtgttttgcaatgtcacccaggtccttgtcctccttgtaaggcatttgctcctgctcga
aaatgcccttgtgggaaaaaaatgattacaactaggtgctctgatcggaaatctgtgctt
acttgcggtcagctttgccataaggttcttgagtgcgggcgtcatcactgcaacaaaatt
tgccatacaggaccttgtgaaagttgtgaggttccaatggatgcttcttgtttctgcaag
aagaaaaaggaggttgtcctctgtggagaaatgtccgtgaaaggtgagctgattggtgga
ggtggtgttttctcgtgtaactcaatttgttcgaaaacccttgtttgcggtaatcatact
tgtggagaggtctgtcatccagggcaatgcggagaatgtgaactaatgccaggaaacatc
aagagctgtccctgcgggaaaacactattgcagaaggaaagggtgagttgtttgagtccg
attccaacttgctctaacacctgtgacaagaccctaccctgtcagattcacagatgtaag
gagacgtgtcatgttggagtttgttcaccttgtgtggttactgttaaccaaaaatgtcga
tgtgggtcttcttcacgtttcgctgaatgctacaaaaaggagaaggatacatttacctgt
gagaagtcttgtgggaggaagaagaactgtggaaggcatagatgcagtgagaggtgttgc
ccactttcgaattctaacaccagatactctggtgattgggatccacatttgtgctcaatg
atttgcgggaaaaagctaagatgtgggcagcattcttgtgaatctctttgtcatagcggt
cattgtccaccatgtctcgagacaatcttcactgatctgacctgtgcatgtggtaagact
tcgatcccacccccgcagccttgtggaacaccggctccatcatgtcagcagctttgttcg
gttcctcagccttgcggccatgcctccactcatggctgccattttggggattgcccacct
tgttcatttcccgtggcaaaggaatgcattggcggacacgttattcttcgaaatattcct
tgtggctcgaaagaaattcgttgcaatcaactttgtggaaaaactcgacaatgtggaatg
catgcttgcagtagaacatgtcacccgcctccatgtgatacttcctgcacgtctacttct
ggttcaagatcaacttgtggccaggtttgtggtgctccgaggagagattgcaagcataca
tgtacctcttcatgtcacccttcatctccttgtcctgaacgtagatgtgagtttccagtg
acgatcacatgtttgtgtggtcggattagtgctacggttccttgtgatgctggtggtaac
actggtgggtttgccagcgatacagtatttgaggctcagctaattcacaagttaccagtt
ccgctgaagcctgtggaagcaaacggcaacaaagttcctcttggacaaagaaagctagtg
tgtgatgatgaatgtgtaaagatggagcgacagaggaaacttgctgatgcttttaaagtt
cctctcctgaatttggaagcccttcatctaggtgaccagtctgtcatctctgagcagctt
caagacttatttaggcgagaacccaagtgggttttgtctatagaggagcgatgcaagttt
ttggtgcttggcaagggtaaagggaatacctcaaatggtctcagggttcatgttttctgt
gcaatggtcaaggaaaagagagatgcagtaaggcaaattgcagggagatggaagctatca
gtccattcagcagggtgggagcctaaacgttttctgattgttcacgtgaccacaaaatcc
aaagcccctgcccgaatacttggtgttaagggttcgtctgtacctctcaccgcctcaaat
ccacctgcttttgatcctttggtagatatggatcaaaggcttgttgtggctcttttagat
ttacccagggaatctaacgtgaatgcgttggtcctgagatttggtggtgaatgcgaattg
gtctggttggatgagtttaacgcattggcaatatttagtgatccaggtcgtgcagctact
gctctgcgaagattagatcatgggtctgcgtaccatggtgctgctgtagttattgcacca
acagtaactaatgtgtggggaacttccaaggaggtaggatctgcaggggctccaaaggcc
aactcatggaagaaagcagttgtgcaggaagcctcgtggggagaagattcgtggggtgtt
gatcagaattggatcaacaatccagcggatgtccagaacgcggtttggagaggaatggaa
actccaattacggcatcgataaaccggtatgacgttcttgaccaagattctgtctcaaaa
tcatctgcagtattatcatctggtggagttgagagaagacctggtaattatcagatagga
agttcttctacctctacagaaccgaagcaggaagcaatggcaggagataagagtgataaa
gaagtggttgctgaagtagttgatgactgggaggaagcttgtgaatga
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