Papaver somniferum (opium poppy): 113282626
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Entry
113282626 CDS
T05758
Name
(RefSeq) probable mediator of RNA polymerase II transcription subunit 37e
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03040
Spliceosome
psom04141
Protein processing in endoplasmic reticulum
psom04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113282626
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
113282626
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
113282626
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
psom01009
]
113282626
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psom03041
]
113282626
03009 Ribosome biogenesis [BR:
psom03009
]
113282626
03110 Chaperones and folding catalysts [BR:
psom03110
]
113282626
04131 Membrane trafficking [BR:
psom04131
]
113282626
03051 Proteasome [BR:
psom03051
]
113282626
03029 Mitochondrial biogenesis [BR:
psom03029
]
113282626
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psom04147
]
113282626
Protein phosphatases and associated proteins [BR:
psom01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
113282626
Spliceosome [BR:
psom03041
]
Complex B
Other components
Prp19 complex
113282626
Complex C
Prp19-CDC5 complex
113282626
Ribosome biogenesis [BR:
psom03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
113282626
Chaperones and folding catalysts [BR:
psom03110
]
Heat shock proteins
HSP70 / DNAK
113282626
Membrane trafficking [BR:
psom04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
113282626
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
113282626
Proteasome [BR:
psom03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
113282626
Mitochondrial biogenesis [BR:
psom03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
113282626
Exosome [BR:
psom04147
]
Exosomal proteins
Proteins found in most exosomes
113282626
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
Motif
Other DBs
NCBI-GeneID:
113282626
NCBI-ProteinID:
XP_026387453
LinkDB
All DBs
Position
5:complement(125977431..125980007)
Genome browser
AA seq
643 aa
AA seq
DB search
MVAIGIDLGTTYSCVAVWQNDRVEIIANDQGNRTTPSYVAFTDTERPVGDAAKNQAAMNP
INTVFDAKRLIGRKIDHTTVQSDIKLWPFKVIAGEDKRPMIQVNYKDEDKLLSAEEISSM
VLMKMRETAEDYLGLTVKDAVVTVPAYFNDSQRQATKDAAKIAGLNILRIINEPTAAGIA
YGLFHQVPDVTSKKKKKKKKNFLVFDLGGGTFDVSILTIKGGIFDVKATAGDNHLGGEDF
DNRMVDHFVQDFKRKHNKDISGNPRALRRLITSCERAKRTLSYTSRTTVEVDALYEGVDF
QSSITRAKFEELNMDLFKKCAETVEMCLRDAKMDKVSIHEIVLVGGSTRIPMVRSLLQDL
FNGRELCKNINPDEAVAYGAAVQAAFMSGEGGEKLKDLVLLDVTPLSLGVEILDDVMKVV
IPRNTTVPTKKQVSCITVKDNQTSARLSVYEGERIRTSDNYMLGTFMVEGIPPLPGGAAK
FEVYFEIDAEGILTVLVEDKISGGTNMVPIADNKGRLSPAEIERLVLEAEEFKSEDEKYK
NKVEARNCFENYAYGMRNTINNIGEKLASDDKKKIEDAVYNAIQWYNSIELADIDVTHDK
MKELQNICDPIIAKVQKQGSPSSTRASSAAPKIRKILRSFRLI
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggtagcaattggaatagatttagggacgacatattcatgtgttgctgtatggcaaaat
gaccgcgttgaaattattgcaaatgatcaaggaaatcgtactactccttcttatgttgct
tttactgatactgaacgtcccgttggtgatgctgctaagaatcaagctgctatgaatcct
atcaacactgtttttgatgcaaaacgtttgattggtaggaaaatcgaccataccactgtt
cagagtgatatcaagttatggcctttcaaagtgattgctggagaagacaagagaccaatg
attcaagtcaattacaaggacgaggataaattgttatcagctgaggaaatctcatccatg
gttctcatgaaaatgcgagaaactgctgaagattatcttggtttaactgttaaggatgct
gttgtcactgtccctgcctacttcaatgattctcagcgtcaagctactaaagatgctgct
aaaattgctggccttaatatactgcgaatcatcaatgaaccaacggcggccggaattgct
tatggtctttttcaccaggtgccagatgtaaccagtaaaaagaagaagaagaagaagaag
aattttcttgtctttgatcttggtggtggtacatttgatgtttctatactcaccattaag
gggggcatctttgatgtcaaggctacagctggagataaccatcttggaggagaggatttc
gataacagaatggttgatcactttgttcaagacttcaagaggaagcacaacaaggacatt
agtggaaatccaagggcactgaggaggttaataacatcatgtgagagggcaaagagaact
ctctcatatacttctcggacaacagttgaggttgatgctttgtacgaaggagttgatttt
caatcatccatcacccgtgctaaattcgaagagttgaacatggatttgttcaagaaatgt
gcggaaactgttgagatgtgtctgagggatgctaagatggacaaggtcagcattcacgag
attgtgctcgtaggtggttccactagaattccaatggttcgatctttattacaggattta
tttaacggaagggaactctgcaagaacatcaaccctgatgaagctgtggcttatggtgct
gcagtacaagctgcttttatgagtggcgagggtggtgagaagttgaaggacttggtgttg
ttggatgtcacccctctttctcttggtgttgaaatacttgatgatgtcatgaaggtggtg
atcccaaggaacacaaccgttcccaccaagaaacaagtgtcttgtattactgtcaaggat
aatcaaactagtgctcgtttatcggtgtatgagggtgagagaattagaactagtgacaat
tacatgttgggtaccttcatggtagaaggaattcctccattacctggtggtgctgctaag
ttcgaagtatacttcgagatcgatgcggaaggtatattgacagtgctcgtcgaggacaag
atatcagggggcacaaatatggttccgattgcagataacaaggggaggttgtccccagca
gagattgagaggttggttctagaggctgaggaattcaaatctgaagatgaaaaatacaag
aataaggtggaggcaaggaactgttttgagaattatgcatacggcatgaggaacacaatc
aataatatcggagaaaagctagcatcagatgataagaagaaaattgaggatgcagtctac
aatgctattcagtggtacaatagcattgaactagcagacattgacgttacacatgacaag
atgaaggagttgcagaatatatgcgaccctataatagctaaggttcaaaagcagggtagt
ccttcttcaacaagagctagcagtgccgcaccaaaaatccgtaaaatcttaagatctttt
cgtttaatctga
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