Papaver somniferum (opium poppy): 113282760
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Entry
113282760 CDS
T05758
Name
(RefSeq) formamidopyrimidine-DNA glycosylase-like isoform X1
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
113282760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psom03400
]
113282760
Enzymes [BR:
psom01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
113282760
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
113282760
DNA repair and recombination proteins [BR:
psom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
113282760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fpg-like_C
DDHD
Motif
Other DBs
NCBI-GeneID:
113282760
NCBI-ProteinID:
XP_026387613
LinkDB
All DBs
Position
5:132670369..132673665
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AA seq
259 aa
AA seq
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MSFTDKRRFAKVRLLKDPTLKPPISELGPDALLEPMTTDEFFQLLRKKKIAIKPLLLDQS
FISGIGNWIADEVLYQARIHPLQVSSSLSKEHCETLQKCIIEVIDKAVEVGADSSQYPSN
WIFHSREKKPGKAFVDGKKIDFITAGGRTTAYVPDLQKLTGEQAKKAALEPKEQTSDGDE
DEENLERKKGNKSKPKKAQTKKPPAKRKGKATSDNDNDSEDDEMEEKKVEKVAKGKQSKA
KVETSDKPKGRQSKNSKKT
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttactgacaagcgacgattcgccaaagtgcgcttgctcaaagatccaacgttg
aaacctccaatctccgagcttggtccagatgcgctgctggagcctatgacaacagacgag
ttctttcagttactgagaaagaagaagattgctattaaacctcttttacttgaccagagc
ttcatttcggggattggcaattggatcgcagatgaagtgctttatcaagcaagaattcat
cctctccaagtttcttcgagcttgtccaaggagcactgtgaaactctgcaaaagtgcatc
atagaggtcattgataaggcagttgaagttggagctgacagtagtcagtatcccagtaat
tggattttccattctcgcgaaaagaaacctggcaaggcctttgttgatgggaagaaaatt
gatttcataacagcaggaggcaggacaactgcttatgtgccagacttgcaaaagcttact
ggagaacaagctaagaaggcagcacttgaaccaaaagaacaaacgtcagatggagatgag
gatgaagaaaatctggaacggaagaagggaaataaatcaaaaccaaagaaagcccagacc
aaaaagcctcctgcaaaaaggaaaggtaaggcaactagtgacaatgataatgacagtgaa
gatgacgagatggaggagaagaaggttgaaaaggtcgcaaaaggtaaacaatcaaaggca
aaggttgaaacatcagacaaaccaaaaggccgtcaaagcaagaactcaaagaaaacttag
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integrated database retrieval system
