Papaver somniferum (opium poppy): 113282833
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Entry
113282833 CDS
T05758
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2-like isoform X1
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113282833
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psom03041
]
113282833
Spliceosome [BR:
psom03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
113282833
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
113282833
NCBI-ProteinID:
XP_026387729
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Position
1:34089369..34093886
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AA seq
535 aa
AA seq
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MNRKRKDDDGKIEVKKPKLDRESSLTPPSVIDNPLLPLASYDDDDDEEEDIRRGRIINED
EQIDGKIGDNGVKEEEEDDYSDDEQDMFQGRRNRQIEIRRDCPYLDTVNRQVLDFDFEKF
CSVSLSNLNVYACLVCGKYYQGRGRKSHAYTHSLEAGHHVYVNLQTEKVYCLPDGYEIND
PSLDDIRHVLNPRFSRDQVVQLEKNKQWSRALDGSDYLPGMVGLNNIKETDFVNVIIQSL
MRVTPLRNFFLIPENYQQCKSPLVHRFGELTRKIWHARNFKGQVSPHEFLQAVMKASKKR
FRIGAQSDPVEFISWLLNTLHADLRSSRSNTSIIYKCFQGELEVVKETHGAEHGKVVMET
TRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFDGESITEVVRPSIARMRYRVT
RLPQYLILHMRRFTKNNFFIEKNPTLVNFPVKNLELKDYIPLPAPKENEKLRSKYDLIAN
IVHDGKPGEGVYRVFVQRKSEELWYEMQDLHVAETLPQMVALSETYMQIYELQQQ
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgaataggaagagaaaagatgatgatgggaaaatcgaagtaaagaagccaaagcttgat
cgggaatcttctttaactcctccctcagtcatcgataatcctcttcttccacttgcttct
tatgatgatgatgacgatgaagaagaggatataaggaggggcagaattattaatgaggat
gaacagatagatggaaagattggagacaatggtgttaaagaagaagaggaagatgattat
tctgatgatgaacaagacatgtttcaaggtaggcgcaaccgccagattgaaatcaggagg
gactgtccttatcttgatactgtcaatcgccaggttctggacttcgatttcgagaaattt
tgttctgtctctctctcaaatctgaacgtgtacgcatgtttagtatgtggaaagtattac
caaggcaggggtcgtaagtctcatgcatatactcacagcctcgaagcagggcaccatgtt
tatgtcaaccttcaaacagaaaaagtttattgccttcctgatggatacgagattaatgat
ccgtcattggatgatattcgacatgttttgaacccaaggtttagtagggatcaagttgta
cagcttgaaaagaataagcaatggtcaagagcccttgatggttcggactatcttcctggg
atggtgggactcaataacattaaggagaccgattttgtgaatgtcattatacagtcgtta
atgcgagttactcctttgaggaacttctttctcattcctgagaactatcagcaatgcaaa
tcgcctcttgttcatcgatttggtgaactcactcgaaagatttggcatgcacggaacttt
aagggccaggtgagtccccatgagttcttgcaggcagtcatgaaagccagcaaaaaacgt
ttccggataggagcacagtccgatccagtggagttcatatcctggctactaaacacactg
catgctgatctcagaagctcgagaagtaacacaagcatcatttacaagtgttttcagggg
gagctggaggttgtcaaagagactcatggagctgaacatggcaaggtagtgatggaaact
actagaatgcctttcttaatgcttggacttgatttgccacctcctcctcttttcaaagat
gtaatggagaaaaatattataccacaggttccattatttaacatactgaagaagtttgat
ggtgagtctattacagaggttgtgaggccttccattgccaggatgcggtatcgagtcacc
agattgcctcaatatcttattctccatatgcgtcggttcacgaaaaacaatttcttcata
gagaaaaacccaactcttgtcaactttcctgtgaagaacctcgagctcaaagactacatt
ccgttacctgcaccaaaagaaaatgaaaagctacgctcaaagtatgatttgattgcaaat
attgttcacgacggaaagcctggggaaggggtttatagagtatttgtacagcggaaatca
gaggaattatggtatgagatgcaggatcttcatgttgccgaaacacttcctcagatggtt
gctctatctgagacttacatgcagatatatgagctgcagcagcagtga
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