Papaver somniferum (opium poppy): 113282969
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Entry
113282969 CDS
T05758
Name
(RefSeq) E3 ubiquitin-protein ligase RNF4-like
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
psom
Papaver somniferum (opium poppy)
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psom04121
]
113282969
Enzymes [BR:
psom01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113282969
Ubiquitin system [BR:
psom04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113282969
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
zf-C3HC4_4
zf-rbx1
Prok-RING_4
Rtf2
zf-RING_10
zf-Nse
Zn_ribbon_6
RING_XB3-XBAT31
zf-RING_4
Zn_ribbon_FGT1_2
Sina_RING
zf-ANAPC11
Rad50_zn_hook
TRAF3_RING
zf-RING_6
DUF4106
zf-P11
CR_prot_dom_plant
Motif
Other DBs
NCBI-GeneID:
113282969
NCBI-ProteinID:
XP_026387862
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Position
5:complement(141436927..141441436)
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AA seq
237 aa
AA seq
DB search
MDTRDPRRTLRGHAKETRRRKNALQIDLNDTPPAEIRAAAALVECSQQGGGRERILLQPQ
PPLTIDLEAIDDEVVISSPRSFAEAKRNKAFRNLEILITAERPAPPPPPRESRVDETGST
LNSSYNMRKRPAASNAVINCDHYINLDGRSNSKKKCAVKPAITPQAAPPKPPPKEAAFSC
PVCMSSLVEATSTKCGHIFCKQCIKSALSAQNKCPTCRKKLTMKDTIRVYLPATEMS
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atggatactcgcgatccgaggaggacactgagaggtcatgctaaggagactaggagaagg
aaaaatgccttacaaattgaccttaatgatacacctcctgctgaaattagggcagctgct
gctttggttgagtgtagccaacaaggagggggaagagaacggattctgctgcaaccacaa
ccaccgttgacaattgatcttgaagctattgatgatgaagttgtcatttcatctccaagg
agctttgctgaagcgaaaagaaacaaggcatttaggaacctggaaattttaattactgcc
gagagaccagcacctccacccccaccccgtgaaagtcgtgtagacgaaactgggtcgact
ctgaatagcagctacaacatgcgcaaaagaccagcagcaagcaatgcagttattaattgt
gatcattacataaacctggatggcagaagcaattccaagaaaaagtgtgctgtgaagcct
gcgataacaccccaggctgcgccaccaaaaccaccgccaaaggaggctgcatttagctgt
ccagtttgcatgagttcacttgtggaggcgacatcaacgaagtgtggccacattttctgc
aaacagtgcatcaagtccgccttatcagctcagaataagtgtccaacatgcagaaaaaag
ctcacaatgaaagatactatcagggtctaccttcctgccaccgaaatgagctga
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